Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01715 ATGGATGTTCTTAGCTTTACCTCAAACCTTAGCAGCAGCACTCACATGCTTCCACTCTCAAAAAAACACCAGACACAACCTCCTCGTACCAAGTTTTCTGTTTCATGCAGAGCCACAAAACAGCTTCCATGTGTTGAGGACAACTTGTACAAGGTACTAAGTCTGAGTCCGAATAGTGCAACCACAGATGACATAAAGAAAGCGTATAGATCAATGGCTCTGCAGTACCACCCTGATGTGTGCCATGATGGTTCCAAGAAAGAGGAGTTGACGAGGATGTTTGTGCAACTCAACGCAGCTTACACCACCTTGTCCAACCCACAGCTTCGAGCAGATTATGACTACGAGTTGGGTTTGAGAACCACGAAAAGTGCGACTGATGAGAGTTGGAGATGGAGGTGGCAGGAGCAAGTTTCCGAGCTGAGGAGAAAGTCTCACACACGTATGGCACAGAAGGAGGGATCGTGGGGCTGTAGAGTCAGAGCACAAAACATGAATTGA 501 0.4711 MDVLSFTSNLSSSTHMLPLSKKHQTQPPRTKFSVSCRATKQLPCVEDNLYKVLSLSPNSATTDDIKKAYRSMALQYHPDVCHDGSKKEELTRMFVQLNAAYTTLSNPQLRADYDYELGLRTTKSATDESWRWRWQEQVSELRRKSHTRMAQKEGSWGCRVRAQNMN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01715 166 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 25 165 - -
Spst6g01715 166 PRINTS DnaJ domain signature 51 69 IPR001623 -
Spst6g01715 166 PRINTS DnaJ domain signature 69 84 IPR001623 -
Spst6g01715 166 PRINTS DnaJ domain signature 89 109 IPR001623 -
Spst6g01715 166 Pfam DnaJ domain 48 114 IPR001623 -
Spst6g01715 166 SUPERFAMILY Chaperone J-domain 43 113 IPR036869 -
Spst6g01715 166 CDD DnaJ 48 106 IPR001623 -
Spst6g01715 166 Gene3D DnaJ domain 34 147 IPR036869 -
Spst6g01715 166 ProSiteProfiles dnaJ domain profile. 48 117 IPR001623 -
Spst6g01715 166 SMART dnaj_3 47 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01715 Spst-Chr6 16336448 16336948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01715 50 114 C2H2 Transcription Factor Family AT1G74250 43.284 1.71e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01715 - - vum:124830030 256.529