Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01711 ATGGCAGCTGCAACAGCTGGTGCTGTGTTAAATGGGTTGGGGTCTTCCTTTTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCACTGCTATTGGAGGCAAAGTTGGTGTTGCTGTGAGTCCTAGAAGACTCATTGTGGTAGCTGCTGCAGTACCAAAGAAGTCATGGCTCCCTGGTGTTAGAGGTGGTGGCAATTTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGTTTTGACCCACTAGGCCTTGGGAAGGACCCGGCATTCCTCAAATGGTACAGAGAAGCTGAGCTGATTCATGGGAGGTGGGCAATGGCTGCAGTAGTCGGAATCTTTGTGGGGCAGGCCTGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCCCCTTTCTCTTTTGGTTCTCTTCTAGGAACCCAGTTGCTTCTCATGGGATGGGTTGAGAGCAAGAGATGGGTGGATTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCGACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCTACCGGTGAACAAGGGTACCCAGGAGGCAAATTCTTTGACCCTTTGGGCTTGGGTGGCACTATCAAAGATGGAGTTTACATCCCGGATACCGAGAAGTTGGACAGATTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGCTGATTTTCTACTTTGAGGCTGGACAAGGAAAGACCCCCCTAGGCGCACTTGGCTTGTAA 777 0.5109 MAAATAGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGVAVSPRRLIVVAAAVPKKSWLPGVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGLGGTIKDGVYIPDTEKLDRLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01711 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 66 256 IPR001344 GO:0009765|GO:0016020
Spst6g01711 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Spst6g01711 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Spst6g01711 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
Spst6g01711 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01711 Spst-Chr6 16307670 16308797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01711 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 80.769 8.42e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01711 K08917 - gmx:100500118 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01711 6 16307670 16308797 Spst6g01711 6 16307670 16308797 ECH
Spst3g00345 3 6197601 6198781 Spst6g01711 6 16307670 16308797 PCT