Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01708 ATGGAGATTCTTAAGAAAAAGAAAAACTTGTTCATGGTGGAGAACTTTGCTGTTCCTGGCACCTTCCATTTTCGTCGCCTTCGAAGTCATTTGCATTTGCAACCCTTTCCGATGGAGGGAGGTAGTTTGTACTCTCTATTGTTTCTTTTGCTCGCTTTGGCTTTTGTCAACTCTGTGCATGGCCAGGGGACACGTCAAGGGTTTTATTCTAGTACGTGTCCTCGCGCTGAGTCCATTGTTAAGTCCGCGGTTCAATCCCACGTTAAGTCTGATCCTACTTTGGCTGCTGGGTTGCTTCGGATGCACTTCCATGATTGCTTTGTGCAAGGTTGTGACGGTTCTGTTCTCATTTCCGGTGCCAACACTGAGAAAACAGCATTTGCTAATCTTGGTTTGAGAGGATTTGAGGTTGTTGATGATGCAAAGACACAGCTCGAGGCCGCATGCCCCGGTGTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCTCGTGATTCCGTTGTTCTGAGTGGTGGACTGAGTTATCAGGTTCCTACTGGACGCAGAGATGGACGCATATCACAGGCTTCTGATGTCAGTAACTTGCCTGCTCCTTTTGACTCTGTTGATGTTCAGAAACAAAAGTTCGCAGCCAAGGGCCTGGACACTCAAGACCTTGTCACCCTTCTTGGTGCACATACCATTGGTACTGCAGCTTGCCAGTTCTTCAGTAACAGATTATACAACTTCACTGCAAACGGTCCTGATCCTTCCATCGACTCTTCATTTCTTCCCCAACTACAATCCCTATGCCCACAAAACGGTGACGGTTCAAAACGAGTTGCCCTAGACACGGGGAGTGAAAAGCTATTTGATTTATCTTACTATAACAATTTGAGAAAAGGGCGTGGAATTCTGCAGTCTGATCAAGCGCTTTGGAGTGATGATTCCACACAGAAAATTGTGCAGAGGTACTTGGGCTTAATAAGAGGGTTGCTTGGATTAAGATTCGACGTGGAGTTTGGCAAATCTATGGTGAAGATGGGCAACATTGGGTTGAAGACTGGTACTGATGGTGAAATTCGCAAGATATGTTCTGCCATCAACTAG 1089 0.4619 MEILKKKKNLFMVENFAVPGTFHFRRLRSHLHLQPFPMEGGSLYSLLFLLLALAFVNSVHGQGTRQGFYSSTCPRAESIVKSAVQSHVKSDPTLAAGLLRMHFHDCFVQGCDGSVLISGANTEKTAFANLGLRGFEVVDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSYQVPTGRRDGRISQASDVSNLPAPFDSVDVQKQKFAAKGLDTQDLVTLLGAHTIGTAACQFFSNRLYNFTANGPDPSIDSSFLPQLQSLCPQNGDGSKRVALDTGSEKLFDLSYYNNLRKGRGILQSDQALWSDDSTQKIVQRYLGLIRGLLGLRFDVEFGKSMVKMGNIGLKTGTDGEIRKICSAIN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01708 362 PRINTS Plant peroxidase signature 152 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 133 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 291 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 275 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 171 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 336 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 97 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 217 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Plant peroxidase signature 73 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 Gene3D Peroxidase, domain 2 196 341 - -
Spst6g01708 362 Pfam Peroxidase 80 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 ProSitePatterns Peroxidases active site signature. 95 106 IPR019794 GO:0004601
Spst6g01708 362 FunFam Peroxidase 67 208 - -
Spst6g01708 362 SUPERFAMILY Heme-dependent peroxidases 65 362 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 ProSiteProfiles Plant heme peroxidase family profile. 63 362 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PANTHER PEROXIDASE 25-RELATED 51 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 CDD secretory_peroxidase 67 361 IPR033905 GO:0004601|GO:0042744
Spst6g01708 362 PRINTS Haem peroxidase superfamily signature 277 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Haem peroxidase superfamily signature 171 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Haem peroxidase superfamily signature 153 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 PRINTS Haem peroxidase superfamily signature 218 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01708 362 Gene3D - 67 362 - -
Spst6g01708 362 ProSitePatterns Peroxidases proximal heme-ligand signature. 218 228 IPR019793 -
Spst6g01708 362 FunFam Peroxidase 196 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01708 Spst-Chr6 16288233 16290230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01708 41 362 Peroxidase AT2G41480 63.467 1.37e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01708 K00430 - gmx:100820620 543.888