Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01707 ATGAGTATTTCATTTATTATCAATGTGGTTCTTCTGCTTGCAATTATATTGCTGTTGCTGCTTTACTACAACACATCCTCAAAGCTGAATAAAATAGTGAAGGGGCAGATTCCCAGAGTCATAGAAAAAGAGAATGACGTGGAGATTAGTGTTGACAAGAAGATAGAGATAGCAGAGGGGACAGTGATTATGACAGTGGAAGAGAGAAAGGAACTGATATTCTTTAACGATAAGCCAAAATTTCAAATGGCTGAACTTCTTAGAGCTTCTGCTGAGCCACTGGGTCATGGGATCTTGGGAAATAGTTATAAGGCTATGCTGAATAGTGGAACTACCATTGTTGTAAAAAGGTTAAGGGACTTGAAGCCATTCACCAAGGAGGAATTTGAGAAGATATTAAATGTGATTGCTGATATGAAACACCCCAATTTGTTGCCCTTGCTTGCTTACTACCATTCCAGAGACGAGAAGCTCATGCTTTACACATACGCAGAGAATGGAAATCTTTTCTCCCGACTTCATGATGGTAGAGGTGGAAACCGAGCTCCATTCAGTTGGAACTCAAGATTGTCAGTCGCAAGAGAAGTGGCTCGAGCATTGGTGTACCTGCACCTCAACCACAAGTTGCACAACATTGTCCCACACGGCAACTTGCGGTCTTCAAACGTACTATTCGATGAAGACGATGCGGTCCTTGTTTCTGACTTCGGTCTTGCCTCCATGATAGCGCAACCAATTGCAGCTCAGCACATGGTTGTTTACAAATCACCTGAATATGGATATGCAAGAAAGGTGACAATGCAATCCGATGTGTGGAGCTATGGTTCCCTTTTGATAGAGCTTCTAACTGGCAAAGTATCTATTAACTCAGCTCCACCAGGAACCAATGGGGTGGACCTATGCAGTTGGGTTCACAGAGCTGTGAGGGAAGAATGGACTGCTGAGATCTTTGACAAAGAAATCTCCGGACAAAAGAGTGCACTTCCTGGGATGCTAAGGTTGTTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCTGAGAAGCGTCCTGAGATGCGAGAGGTGACGAGAGAAGTGGAGAAAATACAAGCCCACTTGATCTCTGAAGATGATGATGATCTGTCTGGGGATAGGTCTCTAACTGATGATTCCCTTTCAACTAGTACATCTGTGATTGGAGATGAAAGATAG 1191 0.4349 MSISFIINVVLLLAIILLLLLYYNTSSKLNKIVKGQIPRVIEKENDVEISVDKKIEIAEGTVIMTVEERKELIFFNDKPKFQMAELLRASAEPLGHGILGNSYKAMLNSGTTIVVKRLRDLKPFTKEEFEKILNVIADMKHPNLLPLLAYYHSRDEKLMLYTYAENGNLFSRLHDGRGGNRAPFSWNSRLSVAREVARALVYLHLNHKLHNIVPHGNLRSSNVLFDEDDAVLVSDFGLASMIAQPIAAQHMVVYKSPEYGYARKVTMQSDVWSYGSLLIELLTGKVSINSAPPGTNGVDLCSWVHRAVREEWTAEIFDKEISGQKSALPGMLRLLQIAMRCIERFPEKRPEMREVTREVEKIQAHLISEDDDDLSGDRSLTDDSLSTSTSVIGDER 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01707 396 Pfam Protein tyrosine and serine/threonine kinase 92 358 IPR001245 GO:0004672|GO:0006468
Spst6g01707 396 ProSiteProfiles Protein kinase domain profile. 88 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01707 396 MobiDBLite consensus disorder prediction 366 396 - -
Spst6g01707 396 SUPERFAMILY Protein kinase-like (PK-like) 92 365 IPR011009 -
Spst6g01707 396 MobiDBLite consensus disorder prediction 380 396 - -
Spst6g01707 396 SMART serkin_6 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01707 396 Gene3D Transferase(Phosphotransferase) domain 1 164 381 - -
Spst6g01707 396 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 365 IPR046959 -
Spst6g01707 396 Gene3D Phosphorylase Kinase; domain 1 57 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01707 Spst-Chr6 16283023 16284630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01707 68 384 Receptor kinase-like Gene Family AT5G58300 42.320 2.20e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst6g01707 PK_Tyr_Ser-Thr 4.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01707 - - vra:106774985 649.047