Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01702 ATGTCTTCGTCTCTTTCGTTGCCGATTCCAATTCCGTTCGCAATGGATTCTCCGTCGTGTGTGACGGTCGCGCAGCTGGCACTTTCCAAACCTCTGAAGCACCACCGTCCTTTGGTCAGAGGCAGAGTCAGACAGCTTCATAGCCGCCTCAACTCCGTTACGCCCTTTCGGTGCTCTTCCGCTGCGAACGACGCCGTCATCACTCTCCACGTTGGGGGAATGATGTGCGAAGGTTGCGCTAATAGCGTCAAAAAACTTTTAGAAAGCCGACCTCAAGTGTTATCTGCACATGTAAATTTGGCATCCGAGACAGCAATTGTTTCGCCTGCACCTGAAGAAAAAACTGCACCAAATTATCTAAAGCAATTAGGGGAGGAACTTGCACAGCATTTAACTACATGTGGTTTTACTTCTACCCTTCGAGATCAAGAAGATAGCAACTGA 444 0.4865 MSSSLSLPIPIPFAMDSPSCVTVAQLALSKPLKHHRPLVRGRVRQLHSRLNSVTPFRCSSAANDAVITLHVGGMMCEGCANSVKKLLESRPQVLSAHVNLASETAIVSPAPEEKTAPNYLKQLGEELAQHLTTCGFTSTLRDQEDSN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01702 147 ProSiteProfiles Heavy-metal-associated domain profile. 65 132 IPR006121 GO:0046872
Spst6g01702 147 FunFam Copper-transporting ATPase PAA1, chloroplastic 65 140 - -
Spst6g01702 147 Pfam Heavy-metal-associated domain 68 125 IPR006121 GO:0046872
Spst6g01702 147 CDD HMA 68 107 IPR006121 GO:0046872
Spst6g01702 147 SUPERFAMILY HMA, heavy metal-associated domain 63 136 IPR036163 GO:0046872
Spst6g01702 147 ProSitePatterns Heavy-metal-associated domain. 71 100 IPR017969 GO:0046872
Spst6g01702 147 Gene3D - 64 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01702 Spst-Chr6 16229153 16230858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01702 66 141 Primary Pumps ATPases AT4G33520 64.474 9.58e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01702 - K17686 vra:106775694 231.491