Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01700 ATGGATTGTTTCTGTTGCTTCAATAAGGGTGCTGGAGGACGCCCTTCATGTAGCTCTGGTAAGGGCAGGAGTCATCTGTGCCCAGTTAAATATGGTTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAATTTGTCAAGTGCAGAGGGCATGAGTTAGGACTCTTTGCTATATATGATGGACACTTGGGAGATAGTGTACCCGCCTATTTACAAAAGCATCTCTTTTGTAATATCTTGAAGGAGGAGGAGTTCTGGACTGATCCTGCCAGTTCTATCGTTAAAGCTTACGAGACAACAGATCAGGCCATTCTTTCTCACAGTTCTGATTTGGGGCGAGGAGGATCGACTGCTGTGACTGCAATTCTTATCAATAATCAGAAGTTATGGGTAGCGAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGAAGGGGGTGGCCATACCGATGACTATTGATCATGAGCCAAATACTGAGAGGGGCTTCATCGAGAACAAAGGCGGTTTTGTCTCAAACATGCCAGGAGATGTTGCTAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAACCTAAAATCACACTTACGATCTGATCCTGATGTTCATCATGTTGATATTGACCCAGATGCTGAGCTTTTGATACTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAAGAAGAACAAAAGATCCACAAAAGGCAGCAAAACAACTAGTTGCCGAGGCATTGGACAAAGACAGCAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGATGA 840 0.4393 MDCFCCFNKGAGGRPSCSSGKGRSHLCPVKYGFSLVKGKANHPMEDYHVAKFVKCRGHELGLFAIYDGHLGDSVPAYLQKHLFCNILKEEEFWTDPASSIVKAYETTDQAILSHSSDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRKGVAIPMTIDHEPNTERGFIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVHHVDIDPDAELLILASDGLWKVMANQEAVDIARRTKDPQKAAKQLVAEALDKDSKDDISCIVVRFKG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01700 279 PANTHER PROTEIN PHOSPHATASE 25 277 IPR015655 GO:0004722|GO:0006470
Spst6g01700 279 Gene3D - 25 279 IPR036457 -
Spst6g01700 279 SMART PP2C_4 26 275 IPR001932 -
Spst6g01700 279 Pfam Protein phosphatase 2C 39 270 IPR001932 -
Spst6g01700 279 CDD PP2Cc 29 277 IPR001932 -
Spst6g01700 279 SUPERFAMILY PP2C-like 20 278 IPR036457 -
Spst6g01700 279 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
Spst6g01700 279 SMART PP2C_SIG_2 41 277 IPR001932 -
Spst6g01700 279 FunFam Probable protein phosphatase 2C 39 22 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01700 Spst-Chr6 16203255 16207292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01700 1 278 PP2C-type Phosphatase Gene Family AT1G22280 69.686 1.21e-141 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01700 K17506 - gmx:100787659 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00368 3 6486498 6489607 Spst6g01700 6 16203255 16207292 PCT