Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01694 ATGGGGTGTGTGCTTGTGCTGCAGTCTGCTGGTGTCACCCCTGAGCATCAAGATCAGAGACAGATTATTGCCGTGAACTCGGATGTGTCTGGTTTGTCTGCGGCTGGTAATGAAAGAGTAAAGGAGGTTGCCTTGTTGGGGATTGAAAATCTCGCAGATGTGCAGATTCATGATCTGTTTGAATGTCGCAAGTGCAACATGAGTTTTGAAGAGAAGGATCCATACTTGCAGCACCTGTTGTCGGTTCACCAGAGGACTACAAGGCGATACCGGCTTGGTTCATCTGTTGGAGATGGAGTTATAATTAAAGATGGGAAGTTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTGGAAAGGCGTCGCTACAATGGTCATGTGGGAATCCATGTTAGGAATTATGTGAGGAGGGTCGAAGATTCACCAGTTCAGGCAAATATCCAGAGGACAGAAGACACGTCTCCAGTCAAGGAGGATGTGCCTTTAAGAATATCTAAGATGGATGCCCTCATTGAAATTGCCCAAAACTCTATTATGGAGGATTCTGTCACGGAACCCCATCATTCACTTAAACTGAATGTGATTCCTGCCCCAGACATTTCTGTTGGTGGCTTGGATCAGGACGGAAACTCAGAGTCTCCAACCAGTGAAAAGCAGATGGAAGATCCCGTGGCTGAAAAAAATGGGGATCATGATATGGATGGAAAAGTAGAGGAAATTGATGATGGTGATGATGATAACCATGTGATAGATGTAAAAATGGTTACTTTTCTGGATAACATGGGTTTGTTATCTGTAAATAAGCAAGATGTTAAAGCATCTGAAACTTCTGACTTAAAAGAGGATGTAGAATTGACTATCGAGGAACTGGATCAATCTGGGATTGATTTAGATTGTGTTTCTGAAATCCGTTTACTTCCTTTATCTGAACAGAACATGATACCGGAATTAGAAAAGAGTGAAAATTCTGGATGTTCTAATACTAAGGTTCGGTTTAAACTTGATGAAGACGTTAGTAACAAGAGTGAGTTGAAATTTGGTTTAAATGGCTTGAAGGATGTACCAGTTACTGTTAGCACTAATGTCCAAGAGATGGTAATGGCAGCGTCTGAAGAAAATGTGGTACATTCTAGGGTTTTTAACTCCTCTATATCCACAGAACAATCTTTGGATTGTTTACCTGCATTCGGCTCTGATAAGGGAGGAAAAGTGTTATGCAGTCTTGACCATGAACATGATAATGTGAAGGGTTTCCAGGAATTGAGGTTTGATGAATTAGATACTGTTGATTATGATTTTGCAAGGGTTCAAGATTCTTCTTCTCTGCCTGCGGTACCAACTGAATTGGCTAATAACACAGTGATGGAACAGACGTACGCATCCTCAGTTCAGTTTGAATCACAGGAGAATATGCTGAATATTGGCGGCAGAAATCAGCTTACAACTATGTGTGTATGGTGTGGAATAGAGTTTAAACATGATGCTGTTAATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGTCCAGCTTGTAAAGCAAAAATCTCTGGTCAAATCAACGTGTTGGACTGTGGATCGCCAAATGCTGGTTGTCTATAG 1599 0.414 MGCVLVLQSAGVTPEHQDQRQIIAVNSDVSGLSAAGNERVKEVALLGIENLADVQIHDLFECRKCNMSFEEKDPYLQHLLSVHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRRVEDSPVQANIQRTEDTSPVKEDVPLRISKMDALIEIAQNSIMEDSVTEPHHSLKLNVIPAPDISVGGLDQDGNSESPTSEKQMEDPVAEKNGDHDMDGKVEEIDDGDDDNHVIDVKMVTFLDNMGLLSVNKQDVKASETSDLKEDVELTIEELDQSGIDLDCVSEIRLLPLSEQNMIPELEKSENSGCSNTKVRFKLDEDVSNKSELKFGLNGLKDVPVTVSTNVQEMVMAASEENVVHSRVFNSSISTEQSLDCLPAFGSDKGGKVLCSLDHEHDNVKGFQELRFDELDTVDYDFARVQDSSSLPAVPTELANNTVMEQTYASSVQFESQENMLNIGGRNQLTTMCVWCGIEFKHDAVNSEIQPDSVGFMCPACKAKISGQINVLDCGSPNAGCL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01694 532 ProSitePatterns Zinc finger C2H2 type domain signature. 62 83 IPR013087 -
Spst6g01694 532 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 88 IPR013087 -
Spst6g01694 532 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Spst6g01694 532 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Spst6g01694 532 MobiDBLite consensus disorder prediction 200 232 - -
Spst6g01694 532 MobiDBLite consensus disorder prediction 218 232 - -
Spst6g01694 532 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 10 295 IPR037472 -
Spst6g01694 532 Gene3D Classic Zinc Finger 50 132 - -
Spst6g01694 532 SMART c2h2final6 107 129 IPR013087 -
Spst6g01694 532 SMART c2h2final6 60 83 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst6g01694 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01694 - - var:108341719 816.224