Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01666 ATGGGAATCCTTCGTGTTCATGATCTCACAAGCCCGCCATATATTTCAACTGATCCATCATTGAATGTGCACAAAATCTCAGATTCAGACCAATTTGTTATAGTTGGGAGTGATGGTTTATTTGATTTCTTCAGTAATGATGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGAAATCCATTTGGTGATCCAGCAAAATTTCTTATCGAGCAATTAGTTGCAAGAGCAGCTGATTCTGCAGGCTTCAGCATGGAAGAGTTGATGAATGTTCCTGATGGGAGGAGAAGGAAGTACCATGATGACGTGACCGTAATTGTGATCATCCTTGGCATGAATCAGCGGACTTCAAAAGCATCAATTTGCACCTAG 372 0.4059 MGILRVHDLTSPPYISTDPSLNVHKISDSDQFVIVGSDGLFDFFSNDEAVQLVESYILRNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPDGRRRKYHDDVTVIVIILGMNQRTSKASICT 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01666 123 Gene3D - 2 119 IPR036457 -
Spst6g01666 123 SUPERFAMILY PP2C-like 9 111 IPR036457 -
Spst6g01666 123 ProSiteProfiles PPM-type phosphatase domain profile. 1 110 IPR001932 -
Spst6g01666 123 PANTHER PROTEIN PHOSPHATASE 14 108 IPR015655 GO:0004722|GO:0006470
Spst6g01666 123 Pfam Protein phosphatase 2C 11 73 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01666 Spst-Chr6 15885025 15885493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01666 1 120 PP2C-type Phosphatase Gene Family AT3G16560 70.000 1.09e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01666 - - gmx:100791404 237.269