Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01665 ATGTGTGTTGATACTGCTTTCTTTTATACCAGTGATGTAATATTGCTAGTGTTGAGAATGGATATCCTAAACCAGGAGATAAGCATGCATAACCCTGAAGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGTGATAGAGGTATACCTTGCAATAAACTCAATAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTGAGTGCAAATGCTACACTTGCCAACACCAACATCTGCAATGGCGTAATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAGATCATTCCGTACGGTACCCTCTTCGTCAAGTTTTCCAAAGTTGGACATGTTATCATCTTCTGTCCATAGTAGTTGTTCAAATCTAAGTTGCAGCCCATCCACTCCAAGTAACATGCTTGAATATGACCCTTGTACATTAAAATCCACGAGTTCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCCATGGATGTTCAAGTTGCTGGAGGAGCAGCTGGTGAAGATAGGGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTCAACGGGAGAGATGCAGCTGACTTTTTGGCTGGTACCCTTTATGACACCATTGTATCTTATTTTAATATGTTACACTGCAATTTGGAACCAGATTCCATAAAAGCTTCCAACCATGCTGCTATGGGTGAATCCTTTCCATATAATTTGGATGATAGTCTTATTATCCAGGAGCATCAGTCTCCTTCAAAATTGAAGAGAAACAATTCTAGTCTTGACTGTTTTGCAAGCAGTACTCCACCTTCCAAGTCAGAAACATCTCCTAAACCATTTTCACATAGTACAGTACTTGATGGTCTTCAGCATGTTCTTAGTCAGGTTGAGAATGATTTCTTATGCATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGCAATGATTTATATACACTTAATCTTGGAGACAGCAGAGCAGTATTGGCAACGTGCTGTACAGATAACAGAATGAATGAGAATGAGAGTGAGAGATTGAAGGCTATCCAGCTTACTGATAGTCATACTGTTGATAATGAAGCCGAAAGAGCTCGCGTTCTTGCTGATCATCCTGATGATCCGAAAACCATAGTAGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACTCGAGCTTTAGGAGCAGGGTACTTGAAAAAGGTTTGCATTCTTTTCAAATTTTAG 1269 0.4011 MCVDTAFFYTSDVILLVLRMDILNQEISMHNPEGELKISFGYQCNSDRGIPCNKLNRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPRSFRTVPSSSSFPKLDMLSSSVHSSCSNLSCSPSTPSNMLEYDPCTLKSTSSPSRSEGFLNAMDVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIVSYFNMLHCNLEPDSIKASNHAAMGESFPYNLDDSLIIQEHQSPSKLKRNNSSLDCFASSTPPSKSETSPKPFSHSTVLDGLQHVLSQVENDFLCMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCCTDNRMNENESERLKAIQLTDSHTVDNEAERARVLADHPDDPKTIVAGKVKGKLKVTRALGAGYLKKVCILFKF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01665 422 SMART PP2C_4 146 419 IPR001932 -
Spst6g01665 422 SUPERFAMILY PP2C-like 168 414 IPR036457 -
Spst6g01665 422 Gene3D - 129 418 IPR036457 -
Spst6g01665 422 CDD PP2Cc 168 415 IPR001932 -
Spst6g01665 422 ProSiteProfiles PPM-type phosphatase domain profile. 155 422 IPR001932 -
Spst6g01665 422 PANTHER PROTEIN PHOSPHATASE 2C 153 414 IPR015655 GO:0004722|GO:0006470
Spst6g01665 422 MobiDBLite consensus disorder prediction 265 284 - -
Spst6g01665 422 Pfam Protein phosphatase 2C 313 415 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01665 Spst-Chr6 15883526 15884794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01665 31 415 PP2C-type Phosphatase Gene Family AT3G16560 57.500 1.23e-131 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01665 - - var:108337154 687.952