Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01655 ATGTCTTCTTCCTTTCCACCTTCCTGGCTCACCTCCCCTTCCTGTTCTACTTTGGACATAGATTCATCTTCCCCTACTGCTTTTTTCGTAGTGCAGTGGTTAAGGTTTCTTGTTCTATCACCATGTCCTCAACGACTTGTTCTCTCCGCCGTTGATTTAATATTTTTGCTCACTCTCTTCGCTTTTGCAGCTGTTAAACTATACTTTAGATTCACTTCCAGTGATACTTCATCTTCCTCCGTCACCAAACCCCTTTTGCAGGAGAAAGATTCTCACTACAAAGTTACCTTCTGGTTCAAACTACCCTTCTTGGTAACCACCCTTTTGGCCGCAGCTTACACGGTTCTTGGCGTCTTGGCCTTTACTCAAACAAGCCTTTCTTCATGGAAAGTCATAGAGGCACTCTTTCGGCTTTTTCAAGCTGTGGCCAACGTAGCGGTAGGGATCCTTTTGTTTCACGAGAACAAGTTCAAAGCTTCAAAGCACCCTTTCTCGCTGAGATTATATTGGATTGCAAACATGGTGGTTTCGTGCTTTTTTGCCATTTCTGCCATTGTTCGCTTTGTAACTGTGGATGGAGCCAGGTTGGAGCCTAGTTTGAGAGTGGATGACGTATTTTCTTTGGTTAATCTCCCACTTTCTGCGTTCCTTTTCGTAGTAGCAACGAAAGGGCTAACCGGGATTCAAGTGGCTAGAATTTCCGATGAATTCACAGCATATCAGTGCCTTTCAAATGACAGAAATTTGAGTCCTTACGCTTATTCTTCATTTTTTTCCAAAGTATTGTGGCTTTGGATGAACCCTTTGCTGAACAAAGGGTACCAAACACCCCTCAAACTTGATGATGTGCCTTCTCTACCCCTGGATTTCCGAGCAGAAAAGATGTCTGAGCTTTTCCAAAGCAATTGGCCGAAGCCAGAGGAAAACAGCAAGCACCCGGTTGGTCTCACCTTGTTTAGATGCTTCTGGAAGCGCATAGCCTTCACTGGCTTCCTTGCAGTTATAAGACTTACGGTTATGTACGTTGGTCCAATGCTTATTCAGAGTTTTGTTGACTACACCTCAAGGAAAGACAGCAGCCCCGTTGAAGGCCTTATTCTCATTCTGATCCTGTATTTGGCAAAATCAGTTGAGGTCCTCTGTGTGCACCAATTCAACTTCAACTCTCAGAAACTAGGCATGTTAATACGTTCGAGCATCATCACTTCCGTGTACAAGAAGGGTTTGAGGCTGTCAAGTTCCTCAAGGCAGACTCATGGCACTGGCCAGATTGTGAACCACATGGCTGTTGATGCACAACAGCTCTCAGATTTGATGATGCAGTTTCACCCCATATGGTTGATGCCACTGCAAGTAGCTGTAGCTTTGGCCCTTATCTACAACAATATTGGCGTGTCAGCTTTTGCAGCGCTGCTTGGAACCAGTTTGGTGTTTGTTTTCACTCTCTTTCGCACCAAGAAGAGCAACATCTTCCAGTTCAGGATAATGAAGAGCCGTGACTTGCGGATGAAGGCCACGAATGAGTTGCTTAACAACATGCGTGTTATCAAGTTCCAAGCGTGGGAGGAGTACTTTGGCAACAAGATTCAGCAGTTTCGGGAAGCCGAACACGGTTGGATTGGAAAGTTTTTGTACTACTTTGCCATTAACATGGGGGTTCTGAGCACTGCTCCTTTGATGGTGTGCGTTCTCACATTTGGAGCTGCTACTCTTCAGGGTATTCCTTTGAACGCTGGTACTGTGTTCACAATCACTTCAGTGATCAAGATTTTGCAAGAGCCGGTGAGGACCTTCCCTCAGGCTCTTATCTTGATTTCCCAAGCGTTGATTTCTCTTGGGAGGTTGGATGAGTTCATGATGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGATTGGATGGATGTGATGGCGACATTGCTGTAGAGATCAAAGATGGGCAATTCTCTTGGGATGATGCAGATGTGAATGTGGCTCTGAAAGTTGAAGAGTTGGAAATCAAGAGAGGGGACCATGCTGCTGTTGTGGGAACAGTTGGTTCAGGCAAGTCTTCATTATTGGCTTCTTTGTTAGGGGAAATGATCAAGATATCAGGAGAGGTGAAAGTTTGTGGGTCAATAGCCTATGTAGCACAGACATCATGGATTCAGAATGCAACAATACAAGACAACATATTGTTTGGTTTACCAATGAACAGAGAGAAGTACAGCGAAACTGTTAGAGTGTGCTGCTTAGAAAAGGATCTTGAAATGATGGAATATGGAGACCAAACTGAGATTGGAGAAAGAGGTATTAACCTCAGTGGTGGCCAGAAGCAACGTGTACAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCAGAAACTGGATCATTTATTTTCAAGGAATGTATCATGGGGGCTCTTAAAAATAAGACCATTTTACTTGTAACCCACCAAATTGACTTCTTGCATAACGTTGACTGTATAATGGTGATGAGAGAAGGGCGCATTGTTCAAAGTGGGAAGTATGATGAACTTCTCAAAGCAGGCCTGGATTTTGGTGCACTTGTGGCTGCTCATGAATCCTCAATGGAGATTGCAGAGTCTAGTGATAGAATTGGTGATGATTCGGTTCAGTCTCCTAAACTGTCTCGCCTCCCTTCAAGAGAAAAGGAAAACGCAGTTGAAAAGAAACCTCAAGATCAAGCTAAGTCAGCGAACACCACAGCAAAGCTCATTGAAGATGAGGAAAGAGAAACTGGCCGTGTGAACCTTAAAGTATATAAACACTACTTCACTGAAGCATTTGGGTGGTGGGGTATTGCACTGATGCTGGCAATGTCTCTCACATGGATTTTGTCATTCTTGGCTGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGGCACTTCCTTTGCTCCTTCTACATTCATTACTGTCTATGCTTGCATAGCAGTTCTTGTAATTGTTGTTGTCATGACAAGATCACTCTTATTTACCTATTGGGGTCTAAAGACATCTCAAAGCTTCTTCGGTGGAATGCTTCAAAGCATCCTGCATGCACCAATGTCATTCTTTGACACCACTCCCTCTGGCAGAATTTTGAGTCGTGTATCTACCGATATACTTTGGGTTGATATATCAATTCCAATGCTAGTAAACTTCGTAATGGTCGCGTATTTCTCAGTGGTCAGCATTCTCGTTGTAACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTAATACCACTATTCTATCTTAATAACTGGTATCGGAAATATTACCTTGCATCTTCCCGGGAATTGACTCGCCTTGATTCTATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCCGGTGTTATGACCATTCGTGGCTTCAGAAAACAGAACGCATTTTCTCAAGAAAATATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGCTAACGAATGGCTTGGTTTTCGCTTGGACTACATGGGAGTGGTTTTCCTTAGCACTGCCACTACTTTTATGATCTTTCTCCCAAGTGCTATTATTAGGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGTTTGGCCCTCAGTAGTCTTTTGGCATTTACCATAACAATGACTTGCTCTGTCGAGAACAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCACCAACCTTCCCTCAGAAGCTCCATGGAAAATTGCTGATACCTCTCCTCCTCAGAATTGGCCCACCCATGGCCACATTGAGTTAAACGATGTGCAGGTTCGGTATCGGCCTAATACTCCTCTGGTTCTCAAAGGAGTCTCTCTCACCATTCAAGGAGGAGAAAAAATCGGTGTAGTTGGTCGTACAGGGAGTGGGAAATCAACCCTCATTCAAGTGTTATTTAGGTTAATTGAGCCTTCAGCTGGGAAAATATTTGTTGATGGGATCAACATTTGCACTTTGGGCCTTCATGATCTGAGGTCTCGATTTGGAATTATCCCTCAAGAGCCTGTTCTCTTTCAAGGAACAGTACGAAGCAACATTGACCCCCTTGGGCAGTATTCAGAAGAAGAAATCTGGAAGAGCCTTGAACGTTGCCAACTGAAAGACGTGGTGGCTGCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTATGCTTAGGAAGAATCATGCTAAAACGCAGCAAAATACTGTTCATGGATGAGGCAACAGCATCCGTTGACTCACAAACTGATGCTGTGATACAAAAAATCATCCGTGAGGACTTTGCAGATCGTACAATTATCAGCATTGCTCATAGAATACCAACAGTCATGGACTGTGACAAAGTTTTAGTCATTGATGCAGGGCTTTCAAAGGAATATGACAAGCCATCACGTTTGCTAGAAAGGCCTTCACTTTTTGGAGCATTGGTTAAAGAATACTCCAGCAGATCTGCATAA 4506 0.437 MSSSFPPSWLTSPSCSTLDIDSSSPTAFFVVQWLRFLVLSPCPQRLVLSAVDLIFLLTLFAFAAVKLYFRFTSSDTSSSSVTKPLLQEKDSHYKVTFWFKLPFLVTTLLAAAYTVLGVLAFTQTSLSSWKVIEALFRLFQAVANVAVGILLFHENKFKASKHPFSLRLYWIANMVVSCFFAISAIVRFVTVDGARLEPSLRVDDVFSLVNLPLSAFLFVVATKGLTGIQVARISDEFTAYQCLSNDRNLSPYAYSSFFSKVLWLWMNPLLNKGYQTPLKLDDVPSLPLDFRAEKMSELFQSNWPKPEENSKHPVGLTLFRCFWKRIAFTGFLAVIRLTVMYVGPMLIQSFVDYTSRKDSSPVEGLILILILYLAKSVEVLCVHQFNFNSQKLGMLIRSSIITSVYKKGLRLSSSSRQTHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAVALALIYNNIGVSAFAALLGTSLVFVFTLFRTKKSNIFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFLYYFAINMGVLSTAPLMVCVLTFGAATLQGIPLNAGTVFTITSVIKILQEPVRTFPQALILISQALISLGRLDEFMMSKEMDEGAVERLDGCDGDIAVEIKDGQFSWDDADVNVALKVEELEIKRGDHAAVVGTVGSGKSSLLASLLGEMIKISGEVKVCGSIAYVAQTSWIQNATIQDNILFGLPMNREKYSETVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDVFSAVDAETGSFIFKECIMGALKNKTILLVTHQIDFLHNVDCIMVMREGRIVQSGKYDELLKAGLDFGALVAAHESSMEIAESSDRIGDDSVQSPKLSRLPSREKENAVEKKPQDQAKSANTTAKLIEDEERETGRVNLKVYKHYFTEAFGWWGIALMLAMSLTWILSFLAGDYWLAIGTAEGTSFAPSTFITVYACIAVLVIVVVMTRSLLFTYWGLKTSQSFFGGMLQSILHAPMSFFDTTPSGRILSRVSTDILWVDISIPMLVNFVMVAYFSVVSILVVTCQNAWETVFLLIPLFYLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNAFSQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLSTATTFMIFLPSAIIRPEYVGLSLSYGLALSSLLAFTITMTCSVENKMVSVERIKQFTNLPSEAPWKIADTSPPQNWPTHGHIELNDVQVRYRPNTPLVLKGVSLTIQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIFVDGINICTLGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGQYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGLSKEYDKPSRLLERPSLFGALVKEYSSRSA 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01655 1501 Gene3D - 1245 1493 IPR027417 -
Spst6g01655 1501 MobiDBLite consensus disorder prediction 890 904 - -
Spst6g01655 1501 FunFam ABC transporter C family member 3 1244 1495 - -
Spst6g01655 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1224 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst6g01655 1501 Pfam ABC transporter 1278 1426 IPR003439 GO:0005524
Spst6g01655 1501 SMART AAA_5 1287 1472 IPR003593 GO:0016887
Spst6g01655 1501 SMART AAA_5 668 841 IPR003593 GO:0016887
Spst6g01655 1501 FunFam ABC transporter C family member 10 310 623 - -
Spst6g01655 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 860 IPR027417 -
Spst6g01655 1501 FunFam ABC transporter C family member 5 909 1242 - -
Spst6g01655 1501 Pfam ABC transporter 663 792 IPR003439 GO:0005524
Spst6g01655 1501 SUPERFAMILY ABC transporter transmembrane region 317 619 IPR036640 GO:0005524|GO:0016020
Spst6g01655 1501 FunFam ABC transporter C family member 4 624 883 - -
Spst6g01655 1501 Gene3D - 622 883 IPR027417 -
Spst6g01655 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 864 IPR003439 GO:0005524
Spst6g01655 1501 SUPERFAMILY ABC transporter transmembrane region 943 1241 IPR036640 GO:0005524|GO:0016020
Spst6g01655 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst6g01655 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1494 IPR027417 -
Spst6g01655 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1261 1495 IPR003439 GO:0005524
Spst6g01655 1501 CDD ABC_6TM_ABCC_D2 942 1236 IPR044726 GO:0140359
Spst6g01655 1501 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Spst6g01655 1501 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524|GO:0016887
Spst6g01655 1501 MobiDBLite consensus disorder prediction 872 912 - -
Spst6g01655 1501 CDD ABCC_MRP_domain2 1259 1479 - -
Spst6g01655 1501 Gene3D ABC transporter type 1, transmembrane domain 312 621 IPR036640 GO:0005524|GO:0016020
Spst6g01655 1501 Gene3D ABC transporter type 1, transmembrane domain 909 1242 IPR036640 GO:0005524|GO:0016020
Spst6g01655 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 1497 - -
Spst6g01655 1501 CDD ABCC_MRP_domain1 641 841 - -
Spst6g01655 1501 Pfam ABC transporter transmembrane region 328 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst6g01655 1501 Pfam ABC transporter transmembrane region 963 1186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01655 Spst-Chr6 15787593 15796564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01655 626 890 Calmodulin-binding Proteins AT2G36910 31.142 5.16e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01655 - K05665 vra:106762025 2646.69