Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01653 ATGGTTGCGGTGGCGTTTAGGGTTTCTCTCTCTTCTTCTCCTGCATTTCCTTTTTCTGCCATAATCGCCGAAGCAAGCGGAATCCAATTCGTCGCGGTCACTCCTTCGAACAACTCCGTTTCAGATCTGAATCGCCGCCGTTTCGGAGATCCACAGTGCCTGCATTCTCCGTTCAATTCTCGCACCTTTCATGTTCTTCCCGTGAGCCTCGCCCGCCACGCGAGTGGCCAGATGCCGCAGGGCAATGCTGCCGCCGCTGCCGCTCTTCTAGACCACGGCGGCGATGCCGGAGACGCAGTCATGGCGCGGTGGCTCCAGTCCGCCGGCTTGCAGCATCTCGCTTCTCCCCTAGCTTCCACCGCCATCGATCATCGCCTCCTCCCCAACCTGCTCATGCAGGGTTATGGAGCACAGTCTGCTGAGGAGAAGCAGAGGCTTTTGAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCAGAGCCATATACGCCCACCGCCCAATCGTTAGGTGGAGTGGCTGGGTCTGATGGGTTTTATTCTCCTGAGTTCCGTGGGGATTTTGGAGCCGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTACCTGGGCATGTAGTTTCAGAACCTTTCGAGCCATCACCCTTCATGCCTGGACATGCCAGAGTATTTGAAGACGATTTTAATCCAACTAACAGCAAGCTGGAAAGCGTGGAATCAGATGCTGATGCATCAATTTCTGTACCAATGAATGAAAAAGAGTATAGCACAAGGGAAAGTAATGTTGCTAAAATTAGAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTTGCCAAGAAGGAGGATGATATTGTAACTGTATCTGAGAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCACGAGTTTTGTTTTGATGCTGTGCTTGATGAGCAGGTTACCAATGATGAAGTTTACCAAACTACAGTTGAACCAATTATTCCTACAATTTTTGAGCGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGATCTTGTTCGACAGTTGCATCAGTCAGTTTACCGGAATCAGAGATTTAAATTGTGGCTTAGCTATTTTGAGATATATGGTGGAAAACTTTATGATCTTCTTAGTGACAGAAAGAAACTTTGCATGAGGGAAGATGGACGACAACAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAGGGGAAATGCTGCTAGAAGTACAGGATCCACTGGTGCTAATGAAGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAAACACACTGAAGTGAAACAGAGCAAGCGAAACAATGATGGGAATGAGGCAAGAAGTGGGAAGGTTGTTGGGAAAATTTCTTTTATTGATCTTGCTGGAAGTGAACGAGGTGCTGACACTACGGATAATGATCGTCAGACTCGGATTGAAGGAGCGGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAGTGCATCCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGGGGAAGTAAACTTACAGAAGTCCTTCGTGACTCCTTTGTGGGTAATTCAAAGACTGTAATGATCTCTTGTATATCTCCAGGTGCTGGGTCTTGTGAACACACACTTAATACCTTGAGATATGCTGATCGAGTTAAAAGTCTGTCCAAAAGTGGGAATTCTAGAAAAGACCAGGTCCCAAATCCTACACCACAAACTAATAAGGAGATTTCATCTACATCATCCATTCCAGCTAGTGTTGGTGCAGAGGATTTTAACAATCAGCGTCAAGAGAAAACAATGGATGTAGGCAGGAAATTTGTTGAAAAGGAAAATTCTTTTTACAGCTCTTCTGCTACTGTTGACAAACAGCCATTAAGTTTTTCTTCAAATTACCTATCAAATGGGCGGCGAGAGGAAAAAGGCTTACCTTCTGCTTCATTGGACCGGGAGAGGTTTGAACTGAAGAACTCATGTGGTGACTCTATCGGTCAAAAGATGAACTCTTACTCACAAATTGATACAGGTGAGAAATTTCAAAAAGTGTCTCCCCCACGAAGAAAAGGGTCTAAGGATGAAAAATCTGAAAGGTCTGCAAACTTGATGAAAAGGGATTCCATTGGTTCTGATCCCTTCACTACAAGCTCCAAGCAGCATAGCACGGGGAATTATAGCCCTGTGTCTAAGGATGAAAAGTTTGATAGGCCTTCAAACTGGATGAAAAGGGATTCCAATGGTTCTGATCTGTTCACTACAACCTCCAAACAGCAGAGCACAGGGAATTATGTTTCTAAGGATGAAAAATCTGAAAAGCCAGCAAACTGGATGAGAAGGGATGCCAGCACCTCTGATTCCTTCTCTACAGGCTCCAAGCAGCAGATCACGGGGCACTTTAACAATATTACCACTGAATCCAGGCCTTTTGAAGCAGAAACCTTGCCTAACGGGAATATCAATGCAGTACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAGGAAATTGAGGATACAATGGAGATTGTTCGTGAAGAAATGAAACTCCTGGCGGAAGTGGACCAACCGGGAAGCCTTATTGACAACTATGTAACCCAATTGAGTTTTGTGCTATCTCGCAAAGCAGCGAGTCTGGTGGGTCTTCAAGCTCGTCTTGCAAGATTCCAGCATCGACTAAAAGAGCAGGAGATTCTAAGTAGAAAAAGAGTTCCCCGTCAGTAA 2859 0.4456 MVAVAFRVSLSSSPAFPFSAIIAEASGIQFVAVTPSNNSVSDLNRRRFGDPQCLHSPFNSRTFHVLPVSLARHASGQMPQGNAAAAAALLDHGGDAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYTPTAQSLGGVAGSDGFYSPEFRGDFGAGLLDLHAMDDTELLPGHVVSEPFEPSPFMPGHARVFEDDFNPTNSKLESVESDADASISVPMNEKEYSTRESNVAKIRVVVRKRPLNKKELAKKEDDIVTVSENAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEQVTNDEVYQTTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQSVYRNQRFKLWLSYFEIYGGKLYDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIERGNAARSTGSTGANEESSRSHAILQLVVKKHTEVKQSKRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNSRKDQVPNPTPQTNKEISSTSSIPASVGAEDFNNQRQEKTMDVGRKFVEKENSFYSSSATVDKQPLSFSSNYLSNGRREEKGLPSASLDRERFELKNSCGDSIGQKMNSYSQIDTGEKFQKVSPPRRKGSKDEKSERSANLMKRDSIGSDPFTTSSKQHSTGNYSPVSKDEKFDRPSNWMKRDSNGSDLFTTTSKQQSTGNYVSKDEKSEKPANWMRRDASTSDSFSTGSKQQITGHFNNITTESRPFEAETLPNGNINAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01653 952 MobiDBLite consensus disorder prediction 601 640 - -
Spst6g01653 952 Gene3D Kinesin motor domain 245 604 IPR036961 -
Spst6g01653 952 CDD KISc_KIF2_like 267 599 - -
Spst6g01653 952 ProSiteProfiles Kinesin motor domain profile. 267 601 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 MobiDBLite consensus disorder prediction 672 840 - -
Spst6g01653 952 MobiDBLite consensus disorder prediction 601 643 - -
Spst6g01653 952 PRINTS Kinesin heavy chain signature 348 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 PRINTS Kinesin heavy chain signature 458 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 PRINTS Kinesin heavy chain signature 501 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 PRINTS Kinesin heavy chain signature 551 572 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 MobiDBLite consensus disorder prediction 707 724 - -
Spst6g01653 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 601 IPR027417 -
Spst6g01653 952 MobiDBLite consensus disorder prediction 688 703 - -
Spst6g01653 952 MobiDBLite consensus disorder prediction 753 773 - -
Spst6g01653 952 SMART kinesin_4 265 607 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 FunFam Kinesin-like protein 246 604 - -
Spst6g01653 952 Pfam Kinesin motor domain 273 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01653 952 Coils Coil 924 944 - -
Spst6g01653 952 MobiDBLite consensus disorder prediction 726 749 - -
Spst6g01653 952 PANTHER KINESIN-RELATED PROTEIN 6 95 949 IPR027640 GO:0003777|GO:0007018
Spst6g01653 952 MobiDBLite consensus disorder prediction 824 840 - -
Spst6g01653 952 Coils Coil 868 899 - -
Spst6g01653 952 MobiDBLite consensus disorder prediction 788 809 - -
Spst6g01653 952 ProSitePatterns Kinesin motor domain signature. 500 511 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01653 Spst-Chr6 15760092 15769199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01653 253 601 Calmodulin-binding Proteins AT5G65930 34.349 1.53e-43 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01653 K10393 - gmx:100800014 1497.26