Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01650 ATGGAAGGTAACAAGGACGAAGCACTGCGCTGCGTTCGAATTGCCGAGGAGGCAATTGCGTCGGGGAACAAAGACCGCGCCCTCAAATTTCTCAAAATCGCTCAGCGCCTCAACAGCGATTTGCCGATTCAATCAATGCTCCACAGATGCGAGAGCCTCGATTCTCACTCCCCCTCCGCCGTTCCCGTGGCGGCCACCGGTCCTTCTCCGCGCCGCGAAGGTTTGAACGGGGAGAGGAGTCACGCGAATTACACGGTGGAGAACGTTCAGTTGATTAGGGAAATCAAAGGAAAGAGCGACTACTACGCGATTCTTGGATTGGAGAAGAGTTGCTCCGTCGAGGAGATTAGGAAAGCGTATCGGAAGCTCTCGCTCAAGGTTCATCCCGATAAGAACAAAGCGCCAGGCTCCGAAGACGCTTTCAAGAAGGTCTCGATGGCTTTCAAGTGTTTGAGCGACGACGGTTCTAGAAGGATGTACGACCAGACCGGAAGCGTCGACGATTGTGACCACAGAGAGGTGAACACTTTCCGACGGAGGAGAAGAAGGACGACGGCGGGAACCACGGCGCGCGATTTCTTCGAAGACGAGTTCGATCCCGACGAGATATTTAGGACGTTCTTCGGACACTCTGATGTGTTTGGGAGGAACCACGTTTTTAGGACCCGCGGCATGGGCAATCACCACAGGCCTGAGGTTAATGCTGGATCGGGAGGGAGGCATCACAATGTTATGCTTCTGATTCAGCTTTTGCCGTTTTTGATCATTGTGCTGCTCGCGTACTTGCCGTTTTCTGAGCCTGAATATTCCTTGCACAAGCACTACAGCTACCAGATTCAGAAAACAACTGAGCTGCATGGGGTGAAGTTCTTCGTGAAATCGCCAGCGTTTGATGCAAATTATCCGGTGGGGAGTGATGCTCGTGTGGCAGTTGAGGAGAGTGTGATAAAGGATTACAGGAGTATGCTTCGGAGGTACTGTCAAATGGAGATGCAGAGACGGAGTTGGAATAGGAATTTGCCTACTCCTCACTGTGATAAGCTGCAGAAATTCTCAGTCACGGCATGA 1068 0.5197 MEGNKDEALRCVRIAEEAIASGNKDRALKFLKIAQRLNSDLPIQSMLHRCESLDSHSPSAVPVAATGPSPRREGLNGERSHANYTVENVQLIREIKGKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSMAFKCLSDDGSRRMYDQTGSVDDCDHREVNTFRRRRRRTTAGTTARDFFEDEFDPDEIFRTFFGHSDVFGRNHVFRTRGMGNHHRPEVNAGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYSYQIQKTTELHGVKFFVKSPAFDANYPVGSDARVAVEESVIKDYRSMLRRYCQMEMQRRSWNRNLPTPHCDKLQKFSVTA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01650 355 SMART dnaj_3 99 156 IPR001623 -
Spst6g01650 355 SUPERFAMILY Chaperone J-domain 96 215 IPR036869 -
Spst6g01650 355 Gene3D DnaJ domain 97 219 IPR036869 -
Spst6g01650 355 MobiDBLite consensus disorder prediction 54 77 - -
Spst6g01650 355 PRINTS DnaJ domain signature 136 156 IPR001623 -
Spst6g01650 355 PRINTS DnaJ domain signature 102 120 IPR001623 -
Spst6g01650 355 PRINTS DnaJ domain signature 120 135 IPR001623 -
Spst6g01650 355 ProSiteProfiles dnaJ domain profile. 100 164 IPR001623 -
Spst6g01650 355 PANTHER AT29763P-RELATED 1 350 - -
Spst6g01650 355 CDD DnaJ 100 153 IPR001623 -
Spst6g01650 355 Pfam DnaJ domain 100 161 IPR001623 -
Spst6g01650 355 Pfam Domain of unknown function (DUF1977) 265 335 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01650 Spst-Chr6 15734857 15735924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01650 23 161 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.972 2.21e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01650 K09518 - gmx:100820432 558.91