Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01631 ATGAGTGGACATGACAATGGCCGTGAACAAGACAAGAGGTTTGCCATTGTCTTGGTCTCTACAATCCTCATTGTGGCTATGGTGCCCGAAGTGGCTTCGGATAAAAAAGTAGAAGAAGAAGAAGAAGGGAATAGCATGAGTACCTTTAACACTATGGTTAATGGAAACTTAATTTGCCAATCAACGGAGCACAGAGATTTGTGCGAGAAAACCCTTGGGAGTTCACTCATGAAAGTCACAGACCCGAAGAAGCTCCTCGAAGCTGGGTTCAATGCATCAGTGGCGGAACTCTTAGGCAAAATAAACAACTCTACCCTTTACAACGAGATGGCCGTAGATAACATGACAAGACAAGCCATGGATATCTGTACGGAAGTTTTGGACTATGCAGTTGATGGCATTCTGAAATCTACTAAGACATTGGACAAAGTTGACATTAACAAGTTGAGTGGACATATTTTTGACCTCAAGGTTTGGCTCACAGGGAGTATTGCTCACCAATACACTTGCTTGCAAGGGTTTGAGAGCTTAAAAGGAATGGAAAATATCAGTAAGGCAATGGCTCAAGTTCTGCGTGTCTCGTTGGAGCTTACTGACAATGCGTTGGATATGACCAACGTGATCCAGAAGGTGCTCAAAATACAATCAAATAAGTTTGCCAACAGGAGACTTCTCAGTCCTGAAGCAACTCTTCCGGATGGGTTCCATTCCTGGGTTGGTGAAGCCGAACGACGTTTTCTCCAGTCTTCAGGCAATTACTATAATGCGGTTGTGGCTCAAGATGGCTCTGGCCAGTTCAAAACAGTCAATGAAGCTCTTCGGACTGTTCCTTATTACAATGACAAACCTTTCTTCATTCATGTCAAAGCTGGTACCTACACGGAAAAAGTTGAGGTCACCAAGGCCATGACCCATGTCACCATGATTGGAGATGGTCCTAGAAATACTATTTTCACTGGCAGTTTAAACTATGTTGATGGTGTTGTGACTTTCAACAGTGCTACCTTTGGAAGGGAAATGGGATTTAAAAACACGGCAGGGAGTGCGAAACACCAAGCAGTGGCACTCATGGCAACAGGAGACAAAATTGTATTCCATAATTGCTTCATGGATGGGCACCAAGACACGCTCTTTGCACAATCCCAACGCCAATTCTACCGTAATTGCGTCATCAGGGGCACCATTGACTTTGTCTTTGGGGATGCCCTTGGAGTGTTCCAAAACTGCAGACTCGTTGCGAAAGTACCCCTACGTGAGCAAAAATGCATGATGACAGCAAGTGGCAGAAGCACATCTGATAGTACTAGTGGCTTGTTGTTTCAAGGTTGCTACTTCACAGGGTTTCAAGAAATGCTTAAGGCAAACCCTAAGCAAGCATACCTTGGAAGGCCATGGCATGAATACTCTAGGGTGGTCATCATGGACTCTCGAATTGATGATGTGATTGCACCAGAAGGGTACGAAGCATTTACGGGACATAAAAACACGAACACATGCACTTATTATGAGTATAATAACAGGGGTCCTGGTTCTGACACATCACGAAGGGTTCAATGGCCAGGTTTTAAGGTCCTATCCTCTTCTGAAGCATCTCAGTTTTACCCTAGCAAGTTCTTTGATGTTGCTAATTCGGCTGATGGTGATAAATGGATAGTTGACACTGGAATACCCTACTATCCTGGTCCTGGTTCTGGTTCATCGCCCAGTTCATAA 1713 0.4431 MSGHDNGREQDKRFAIVLVSTILIVAMVPEVASDKKVEEEEEGNSMSTFNTMVNGNLICQSTEHRDLCEKTLGSSLMKVTDPKKLLEAGFNASVAELLGKINNSTLYNEMAVDNMTRQAMDICTEVLDYAVDGILKSTKTLDKVDINKLSGHIFDLKVWLTGSIAHQYTCLQGFESLKGMENISKAMAQVLRVSLELTDNALDMTNVIQKVLKIQSNKFANRRLLSPEATLPDGFHSWVGEAERRFLQSSGNYYNAVVAQDGSGQFKTVNEALRTVPYYNDKPFFIHVKAGTYTEKVEVTKAMTHVTMIGDGPRNTIFTGSLNYVDGVVTFNSATFGREMGFKNTAGSAKHQAVALMATGDKIVFHNCFMDGHQDTLFAQSQRQFYRNCVIRGTIDFVFGDALGVFQNCRLVAKVPLREQKCMMTASGRSTSDSTSGLLFQGCYFTGFQEMLKANPKQAYLGRPWHEYSRVVIMDSRIDDVIAPEGYEAFTGHKNTNTCTYYEYNNRGPGSDTSRRVQWPGFKVLSSSEASQFYPSKFFDVANSADGDKWIVDTGIPYYPGPGSGSSPSS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01631 570 CDD PMEI-like_3 57 208 - -
Spst6g01631 570 FunFam Pectinesterase 4 252 562 - -
Spst6g01631 570 SUPERFAMILY Pectin lyase-like 255 559 IPR011050 -
Spst6g01631 570 Pfam Plant invertase/pectin methylesterase inhibitor 58 204 IPR006501 GO:0004857
Spst6g01631 570 Pfam Pectinesterase 255 539 IPR000070 GO:0030599|GO:0042545
Spst6g01631 570 Gene3D - 253 562 IPR012334 -
Spst6g01631 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 208 IPR035513 -
Spst6g01631 570 PANTHER PECTINESTERASE 20 552 - -
Spst6g01631 570 SMART PMEI_2 50 204 IPR006501 GO:0004857
Spst6g01631 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 210 IPR035513 -
Spst6g01631 570 NCBIfam pectinesterase inhibitor domain 58 207 IPR006501 GO:0004857
Spst6g01631 570 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01631 Spst-Chr6 15571222 15573081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01631 3 561 Carbohydrate Esterase AT3G05610 38.261 5.38e-147 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01631 K01051 - gmx:100785214 619.772