Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01618 ATGGCCACGGAGCAATTAATGTCCAGTGGCGGCCCTCGATACGTTCAGATGAAATCATCGCCACCGCCGTCGCCACCGGCTGCGGCTGCTGAGGAGATGTCATCGGTTCCATCGTTCCGGCACAGCAGCGCAGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATCGTTTCGGTGTCCCGCCCCGACGCCGGCGATATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAAACAGGGAATCTCTGATCGCGAGCACTGCAGCCAATTGTGTGAAGCTAAAGCAAGCGAAATCCAAGGAAATTGGATCCTTTATTTGCAGCCGATTGCTTCTTCGTACGCTGTGTTTTTTAAGTGGGAGCTAATGAAGAAAGCTCATCAAGTATTTATTTTGCATTTTGCGTTAAAGAAACGTGCCTTCATTGAGGAGATCCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACAATGCTATGGTGCAAGATGACGATGAAGGTGATGATGAAACTGTTCCGATCCATACTGATGAAATTCATGAAAGTGCTAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATTCGACCAGCCTTAGGAAGACAGCAGTCTATTGCAGAGAGGGCAAAGAGAGCAATGCAAGGATATTTGAATCACTTTTTGGGAAATATCAGTATTGTCAACTCTCCTGAGGATTATTTGTTAGGTAAGGTCGAACATGATGTGTTTCTTTACTACTCTGGCAATGGAATGCCACTATTGTGGGGGTGGCGAGGGTCAGATACTCTGATGCACACATCCATACCCCTCATTAGCAGAGCGGCTTGGAATCCATCAGTACTAAATCACAAGCAAGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCCTTTTCACCTGAATATGGCCCTAAGCTGAAGGAAGAATATGTGATGGTGAAGCATCTGCCCAAAATCCAGAAGGATGATGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGCAAAGAATCCTGCTTGTGGATATGCTTCTCTTATCTTGGTGTGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGACCCTTTCGATATGCAACCTCTGGACATAATTGTTTTTGATGTACTGCCAGCCTCGGATGGGAACGGGGATGGTCGTTTATCACTGGCAAGTGAAGTGAAGGAACGGAATCCTTTACGCCATTCATTCAAGGTGGCTTGTGGAATCCGGAACATCAGAATTAGAGTAAAAAATAGAAATAAAGTTAAAGATTGGGTTGCAGCAATCAACGATGCTGGCCTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATATGCTCCTCCAAGAGGCTTAGTTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCTGAACTGTATCTAAGACGACCTTTTCAAACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGGGTTCAGATTTATATTCTTCTCTACAAAGAGGTGTCTCTAGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCACGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACATCATGAAAAACTTGTCATTATTGATAACCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCAGGAAAAGACTATTATAACCCAAGCTTTATTCTAGCTGAGGCAATACTTGCCTTGGAAACAGCAAGAATTCCAAGAACGATAAAGAAAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGAGATGGAATTATGCAAAGAGGAACAAAGCTCCATACGAGGAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGACAAAGCCAAGAAATACAGATCGAAAGTGGGAACATAGACAATCAAAGAGTTCTTAAGAGAGATGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATACTCATGAAGGAGACCAAAAATTGAATGGTGTAATCTCCCCTTCTCATCACCTTGACAAACCAAGAAGGATCAGCAGTGGTCTTTCATTTTCATTCCGTAAGGCGAAAATTGTAGCAGTTGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCCGAGCATGATTGTGAAAAAATGTCTCTGGATAGAGTTGCTCATTCTGATTTACAAAATACAGATCCAGAATGGTGGGATATGCAAGAACGGGGTGACCAGGGAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCTGTTGCCAAGTTATTAGGAGTGTGAGTCAATGGTCAGCTGGAACAAGTCAAACGGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATTTACATTGAGGGGAGGATTGTCCTTCCTGGTCTTTCTGGAGATGAGATGATACGGAATCGTGTGCTAGAAGCTTTATATCGACGGGTTATGCGAGCTTACAATGACAAAAAATCTTTCAGGATTATAATTGTCATACCACTCCTGCCTGGCTTCCAGGGGGGGCTGGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAGAATTCTATCTTGCAAAATCTTTATGAACTTCTTGGCCCTAAAGTACATGACTACATTTCTTTTTATGGCCTAAGGTCTTATGGTAGACTTAATGGGGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCTAGAGATTCTGAGATTGCTGTAGTTATAGAAGACAGAGAGTTGATTGGCTCTTATATGGATGGAAAACCTTGGAAAGCTGGGAAGTTTTCCTTGACCCTCCGATTGTCATTATGGTCTGAGCACTTGGGTCTCCCTACAGGAGAGGTCAATCAAATAATGGACCCAATTGTTGAATCTACTTACAAAGATATTTGGATGGCAACAGCGAAGTATGCGCTTGAACTTGATGGCATGAAAATTTTGCAGTTACCTGTGGACTATCCCAAAGTCCTTTTAGAGTGCAGTGTGCTTGCCTTGGGAGATGTCTTTTCTTGCGTGCCTAATGATCTGATACACACCAGACATGCCTTCAGACAAAGTGTGGCTTTTTGGAAAGATAAGATTGGTCACACGACCATTGATTTAGGAATAGCCCCAGAAAAATTGGAATCTTATCATGAGGGAGGCATTAAGAACACCGATCCCTTGGAGAGATTAGCATCAGTGAAGGGTCACCTCGTCTCTTTTCCCTTGGAGTTCATGTGTCAGGAAAGTCTGAGACCTGCATTTAATGAAAGCGAATACTACGCTACTCAAGATAAAGAAGTTCAAAGGCTC 3822 0.4328 MATEQLMSSGGPRYVQMKSSPPPSPPAAAAEEMSSVPSFRHSSAEANRIFEELPKASIVSVSRPDAGDISPMQLSYTIQVQYKQGISDREHCSQLCEAKASEIQGNWILYLQPIASSYAVFFKWELMKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHNAMVQDDDEGDDETVPIHTDEIHESAKDRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSPEDYLLGKVEHDVFLYYSGNGMPLLWGWRGSDTLMHTSIPLISRAAWNPSVLNHKQVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDDDSRKCCLSDCFSCCNDNWQKAKNPACGYASLILVWAVLKPGFLALLADPFDMQPLDIIVFDVLPASDGNGDGRLSLASEVKERNPLRHSFKVACGIRNIRIRVKNRNKVKDWVAAINDAGLRPPEGWCHPHRYGSYAPPRGLVEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFQTHASSRLDNLLEGKAKQGVQIYILLYKEVSLALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPSFILAEAILALETARIPRTIKKESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEEAIPLLMPQHHMVIPHYLGQSQEIQIESGNIDNQRVLKRDDSFSSSSQDQDIPLLLPQESDGLDTHEGDQKLNGVISPSHHLDKPRRISSGLSFSFRKAKIVAVGPDTPMKGFVDDLDSEHDCEKMSLDRVAHSDLQNTDPEWWDMQERGDQGGFPEESGQVGPLASCCCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIEGRIVLPGLSGDEMIRNRVLEALYRRVMRAYNDKKSFRIIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILQNLYELLGPKVHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEVNQIMDPIVESTYKDIWMATAKYALELDGMKILQLPVDYPKVLLECSVLALGDVFSCVPNDLIHTRHAFRQSVAFWKDKIGHTTIDLGIAPEKLESYHEGGIKNTDPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQDKEVQRL 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01618 1274 PIRSF PLD_euk 16 248 IPR016555 GO:0004630|GO:0006654|GO:0048017
Spst6g01618 1274 PIRSF PLD_euk 289 750 IPR016555 GO:0004630|GO:0006654|GO:0048017
Spst6g01618 1274 PIRSF PLD_euk 1174 1268 IPR016555 GO:0004630|GO:0006654|GO:0048017
Spst6g01618 1274 PIRSF PLD_euk 739 1150 IPR016555 GO:0004630|GO:0006654|GO:0048017
Spst6g01618 1274 MobiDBLite consensus disorder prediction 1 15 - -
Spst6g01618 1274 Gene3D Endonuclease Chain A 478 735 - -
Spst6g01618 1274 Gene3D Endonuclease Chain A 874 1104 - -
Spst6g01618 1274 Pfam Phospholipase D Active site motif 591 618 IPR001736 GO:0003824
Spst6g01618 1274 SUPERFAMILY Phospholipase D/nuclease 885 1094 - -
Spst6g01618 1274 CDD PLDc_vPLD1_2_yPLD_like_2 905 1088 - -
Spst6g01618 1274 FunFam Phospholipase 879 1098 - -
Spst6g01618 1274 SMART pld_4 591 618 IPR001736 GO:0003824
Spst6g01618 1274 SMART pld_4 1044 1071 IPR001736 GO:0003824
Spst6g01618 1274 CDD PH_PLD 295 454 - -
Spst6g01618 1274 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1044 1071 IPR001736 GO:0003824
Spst6g01618 1274 MobiDBLite consensus disorder prediction 1 36 - -
Spst6g01618 1274 MobiDBLite consensus disorder prediction 762 805 - -
Spst6g01618 1274 Pfam PLD-like domain 1028 1091 IPR025202 -
Spst6g01618 1274 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 591 618 IPR001736 GO:0003824
Spst6g01618 1274 SUPERFAMILY Phospholipase D/nuclease 437 732 - -
Spst6g01618 1274 PANTHER PHOSPHOLIPASE D 292 1260 IPR015679 -
Spst6g01618 1274 Coils Coil 142 162 - -
Spst6g01618 1274 CDD PLDc_vPLD1_2_yPLD_like_1 484 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01618 Spst-Chr6 15405159 15418834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01618 1 1124 Phospholipase D Gene Family (Wang group) AT3G16785 63.628 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01618 K01115 - gmx:100780514 1988.39