Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01617 ATGCAAGACGATAGCGGAGGCACGATGGAAGACAACGACGGGGCGACACCATGCAAGATGAGACGTGACAACTTAGGGCAGCGGACCCACGACAGTAGAAGCAGCTTTACGAGGCCAATGTCTGGTTTACTGCGTCTCCTCAATTGTTTCGTTTTTGGCCAAGGAAAGGAAGAAACTGTTGACTTGTGGATCATTCATATTCCGTTTCAGACACAAATTGCTCAAATTCAACAAACACCATACTTTGTCTCTGGAGTTATTTTGGACATTGAATATCGGAAGGGTGTAGAAGGAAAACCCATGTCTGACAAGAAATCTACTCAAACAAAGTATGATGTTTTTGTTAGCTTCAGGGGCGAGGACATTCGTTCAGGGTTTCTCAGCCATTTGGTTGAGACTTTTCAAAGGAACAAAATAAATGCCTTTGCGGATGATAAACTTGAGAAGGGAAATGAATTATGGGAATCACTTGCGGGAGCAATTGAAGGATCCATCATTTCGTTGATTATATTCTCACAAGGCTATGCTTCTTCGCGTTGGTGTTTGGATGAACTTGAAACAATACTTGAATGCAATATGAAATATGGTCGCATTGTAATCCCTGTTTTCTACCATGTGAAGCCCACAGATGTACGACATCAAACTGGGAGTTACAAAAAAGCATTTGATGAGCATGAAATAAAATACAAGAGCAAGGATGGTGAAAGTGATAACTCAGTAGTTGTTGGGTTAGAAAGGTTGAAAGATAAAGCTCTTGTTACTTTCTCTGACAATAACTTTGTATATATGCATGATATTTTAAAAGAAATGGCTTGGGAGATTCTTCGTCGAAAGTCTAAGGAATACCCTGGAAGCTTTAGTCAGTTGTGGGATTCGCATCACATAGATGAAGCACTTGAAAATGACAAGGGTAGTGAGACCATTAGAAGCATACAAATTGACTGGCCAACAATTAAGAAGCAAAAGTTAAGCCCTCACATATTTGCCAAGATGAACAAACTACAATTTTTGAAAATTTCAGGGCAAAGTCAATATGATTGCATTGATCAACATAATATTCTTGCTGAAGGGCTTCAATTTTTGGCAACTGATCTAAGATATCTTTGTTGGCAATATTACCCTCTAAAATCTTTGCCAGAGAATTTTTCTGCAGTATTACTTGTTGTGTTGAAATTGCCAAATGGCAGATTCAACAAACTTTGGCATGGAGTGAAGAATCTTGTGAATTTAAGAATAGTTGACCTCTCTGACTCCGAGAAGTTGGAGGAGTTGCCAGATTTATCAAAAGCTACAAATCTTGAAGAACTGTATCTCGGGGGTTGTTCTATGTTGAGTAGTGTGCATCCAACTATTTTCTCTCTGGCCAAACTTGAATGTTTGGACCTTGGGTTTTGCACGTCCCTTACCATACTTTCAAGCAATTCCCCTTTATGCAGCCTCAAAGATCTCAACCTGGTTAGGTGCCGGAAACTTGAGGAATTTTCATTGATATCAGAGAATATGACAAACTTAAGATTAACATGGACGAAGGTCACAGCATTTCCCTCGTCATTTGGAGATCAAAGCAAGCTTGAATTGCTATGTCTCCAAGGAAATGACATCAAGAGGACAAAATTTCTGTTGTGGAATTGCTTGAACTTGGATCAACATTCCTTGGCTGCCATTGCGTTGAATGCGCAAATCAATGTGATAAAATTTGCAAACCAACACTTACCTTCACCAGATGATGCTGAACACAACAACTATTGTGATAATACTGATCGTTCCAATCAAATTGTTTATGCGTATCCAGGAAGGTCTGTTCCAGATTGGTTGGAGTACAAGACAAAAAAGAGTTATATAACTATTGATCTCTCTGCTGCTCCACTTTCTTCGCCGGTGGGCTTCATTTTCTGCTTTGTTCTTGGTAAGTACAGAGAAGCAAGGTGTGGAAAAATTGAAGCAAACATCACTATAAGTGATGGTGAGGGTGAACATAGAAAGGAAAGTGTGGGAATGTGCATCGATGATCATTATGATAAAATTGAGTCCGATCACCTGTGTGTGATATATGACCAAGGATGTTCTGGCTACCTATGGAGCAAAGCCAAAAATGGTACAAGGTTGAAAGTCGAGGTGACAGTGATGTTCCGATCCTCATCCAATCATATTTGTGTGCTGCCAGACCACGTGTTTCAAGGATTTGGAGTCAGCCTAATAAGCACATCGGCATATAACAATTTCATTAAAAAAATGGAATTGCGTGACTCCATTCCGCATCGAGTTCCTAGCAGGAGCTCCTGGACGATGAACGTAGCCACCATTGCCTTCATAAACTTCCCCTTCCAAATCTCACCACTCTCCTTTCGCGCCTCCCACCATCCCGCCAATCTCTCACTCTCTTTCACTCCTCTTTCTATCTCCAGAACCGCCATGGCCTCCGCCGCTCTCCGATCGCCCTCTCCGGACACCACCGAACTCTGCGATGAGTCCGACTTCGAATCTCTCCTCTCGCCTGACGGTTACATCTCCATATGTGGCTTCGGCTCTCTCCTCTCCGAGAGAAGCGCACGAAGCACTTTCCCCGATTTGGCGAACTTCCGAACCGCTCGGTTGAACAGCTTCCGGCGCGTCTTCGCTCATGTCGCTCCGGTTTTCTTCGAGCGCGGCATTGCCAAACCCGAAACCATGGAAATTTCGAGCTTGAGTGTGGAGTCATGTGAAGGAGAAACTCTGGTGGTAACAGTTTTTGAGATCAGAAAATCAGAGATTCCAGATTTTATCAAGAGGGAGGTCGAGTTTCGGTTCCTTGCTGTTCTTCCTGAAACGCTCGATGGCAAGGCTTTTGATTTTCCGGCGGTCCTTTGTACACGTTACAGTGATGAGGAATTTTTCAACATCAGATGTAAAGGAAATAAGGAGATCTATTTTCAGCAATATGGTCGGTGGAATATAGATAAAATTTGGAGAGATGATGTGCTACCTTGTCGGGTTTATCTTCGACACTGTGTACTGGCAGCAAAGAATCTTGGTGAAACAGCTTACAACAACTTTCTGGATCACACTTATCTTGCTGACCGTAAAACAACCATTGGCGAATACTTGGCAACAACAGGTTCTGGCATCATGCAAGAGCAGCCCCCTGAATCCCTGAAGCACCGCTATGGCGGTTGA 3153 0.4263 MQDDSGGTMEDNDGATPCKMRRDNLGQRTHDSRSSFTRPMSGLLRLLNCFVFGQGKEETVDLWIIHIPFQTQIAQIQQTPYFVSGVILDIEYRKGVEGKPMSDKKSTQTKYDVFVSFRGEDIRSGFLSHLVETFQRNKINAFADDKLEKGNELWESLAGAIEGSIISLIIFSQGYASSRWCLDELETILECNMKYGRIVIPVFYHVKPTDVRHQTGSYKKAFDEHEIKYKSKDGESDNSVVVGLERLKDKALVTFSDNNFVYMHDILKEMAWEILRRKSKEYPGSFSQLWDSHHIDEALENDKGSETIRSIQIDWPTIKKQKLSPHIFAKMNKLQFLKISGQSQYDCIDQHNILAEGLQFLATDLRYLCWQYYPLKSLPENFSAVLLVVLKLPNGRFNKLWHGVKNLVNLRIVDLSDSEKLEELPDLSKATNLEELYLGGCSMLSSVHPTIFSLAKLECLDLGFCTSLTILSSNSPLCSLKDLNLVRCRKLEEFSLISENMTNLRLTWTKVTAFPSSFGDQSKLELLCLQGNDIKRTKFLLWNCLNLDQHSLAAIALNAQINVIKFANQHLPSPDDAEHNNYCDNTDRSNQIVYAYPGRSVPDWLEYKTKKSYITIDLSAAPLSSPVGFIFCFVLGKYREARCGKIEANITISDGEGEHRKESVGMCIDDHYDKIESDHLCVIYDQGCSGYLWSKAKNGTRLKVEVTVMFRSSSNHICVLPDHVFQGFGVSLISTSAYNNFIKKMELRDSIPHRVPSRSSWTMNVATIAFINFPFQISPLSFRASHHPANLSLSFTPLSISRTAMASAALRSPSPDTTELCDESDFESLLSPDGYISICGFGSLLSERSARSTFPDLANFRTARLNSFRRVFAHVAPVFFERGIAKPETMEISSLSVESCEGETLVVTVFEIRKSEIPDFIKREVEFRFLAVLPETLDGKAFDFPAVLCTRYSDEEFFNIRCKGNKEIYFQQYGRWNIDKIWRDDVLPCRVYLRHCVLAAKNLGETAYNNFLDHTYLADRKTTIGEYLATTGSGIMQEQPPESLKHRYGG 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01617 1050 Gene3D Ribonuclease Inhibitor 293 751 IPR032675 -
Spst6g01617 1050 MobiDBLite consensus disorder prediction 1 37 - -
Spst6g01617 1050 FunFam Disease resistance protein (TIR-NBS-LRR class) 107 278 - -
Spst6g01617 1050 MobiDBLite consensus disorder prediction 15 29 - -
Spst6g01617 1050 Gene3D - 104 280 IPR035897 -
Spst6g01617 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 102 234 IPR035897 -
Spst6g01617 1050 PANTHER OS05G0358400 PROTEIN 802 1050 - -
Spst6g01617 1050 Pfam TIR domain 110 229 IPR000157 GO:0007165
Spst6g01617 1050 ProSiteProfiles TIR domain profile. 109 241 IPR000157 GO:0007165
Spst6g01617 1050 SMART till_3 110 258 IPR000157 GO:0007165
Spst6g01617 1050 SUPERFAMILY L domain-like 263 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01617 Spst-Chr6 15358379 15371898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01617 239 530 WRKY Transcription Factor Family AT4G12020 37.209 6.05e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01617 - - gmx:100781602 504.212