Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01615 ATGGAGCAGCATAATTTTGATGTGAGCATCATGGGACAAGAATCAGATAAAACCCAGTTGGTATTGGAGGTTTGCTCCATTTCCACGCGTTCTGTTTTGTGTGTTCATACAATTGTCTCAAACCCTGATGAACCACCTTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGCTAGTCACCATCCGCAAGCAATACCATAAACTTGCCTTGCAACTTCATCCGGACAAGAATAAACATCCAAAGGCTGAAATTGCATTCAAGCTTATATATGAGGCATATATGTGTCTGTCTGATGCTGCAAAAAGGAAAGCTTTTGACTTAAAGAGATATAAGAATTTCTGCTTTGAGTGCAATAGAATTCCATATACATCCAAAAAAGTCCCTGTCCCTGGCAATCCCAATGGCTCAAGTTTCAAGACACGGAATATCAATAGTGGGTCAAGATCTTATAAAGTTTGGAGAAATCTCAGGGAGGTGAGAGAAAGGCTGAAGGAGGAGGCTAAGGTGATAGAGAATTGTCTGCAGGTAAATTTAATGTCAAAGAAAGAATCTCCCCTCTACAATCCAGCAGACTATAGACAGGATAAAGTTGAGAGAGAAATCCCTGTTTTCAATCCAATGAAATACGTGTACCAAGGGTACCCTCATCTGAGGGGCCATGTTCACAAGAATGGTGAGACATGTTGGTACTTGCATACACAAAATATTGTGCACAACGACAAGGAGGAAGCTAAGTATGCCTCCCCGATATTTGAGGTCAGATCACAAAGTAAATTTTCTTATGACCCATCACGATTCTAG 813 0.4071 MEQHNFDVSIMGQESDKTQLVLEVCSISTRSVLCVHTIVSNPDEPPFIDWYCILGVEENAGLVTIRKQYHKLALQLHPDKNKHPKAEIAFKLIYEAYMCLSDAAKRKAFDLKRYKNFCFECNRIPYTSKKVPVPGNPNGSSFKTRNINSGSRSYKVWRNLREVRERLKEEAKVIENCLQVNLMSKKESPLYNPADYRQDKVEREIPVFNPMKYVYQGYPHLRGHVHKNGETCWYLHTQNIVHNDKEEAKYASPIFEVRSQSKFSYDPSRF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01615 270 ProSiteProfiles dnaJ domain profile. 49 113 IPR001623 -
Spst6g01615 270 CDD DnaJ 49 102 IPR001623 -
Spst6g01615 270 SMART dnaj_3 48 105 IPR001623 -
Spst6g01615 270 Pfam DnaJ domain 49 110 IPR001623 -
Spst6g01615 270 SUPERFAMILY Chaperone J-domain 37 114 IPR036869 -
Spst6g01615 270 Gene3D DnaJ domain 48 160 IPR036869 -
Spst6g01615 270 PANTHER BNAC03G44070D PROTEIN 30 191 - -
Spst6g01615 270 PRINTS DnaJ domain signature 85 105 IPR001623 -
Spst6g01615 270 PRINTS DnaJ domain signature 69 84 IPR001623 -
Spst6g01615 270 PRINTS DnaJ domain signature 51 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01615 Spst-Chr6 15342506 15346920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01615 49 110 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 5.36e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01615 - - gmx:100778573 412.149