Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01594 ATGAGTGGTGCATCAGAAAACCCTATTGATGACAGTAACGAGGGTAAAGGTTCTTCTTTCCCCTCTTCATCAACAAGAACGTTAAAACTTTTCGGTTTCCCATTAACCCCACCGGGTTACGAAGAGATTCACGTGGCAGGAAGTAGCACTATTACTCCTCATTGCCCTTACAAGAGATTCAAGTGCCACTTCTGCTACCGCGAATTCGCGAATTCTCAAGCTCTGGGTGGCCACCAAAACGCGCACAAGAGAGAACGCCAGAAAGCTGCTCTCTCACCCTTGGGTTACTTTCACCGGCATCAACGGTTGACAGCGCGAAATAATCCCCCGGTCGTGGTTCCGTACGGAGGATCGGGAGCGTTGGTTGGTCCACGTGGCAGGGGTCAACGACCGTGGCTCATGCGGGACGCTGATGAGGGACCTTATCATGATCACGATCATGATAGGGTTCGGTCAGTGAGGCCAATGGGTGCAAGTGCAATGAGCATGAGCACAGTGAGGGAATGCATACGAGACAATTTTCTTCAACTCCATATAAACCCCAAGACACACATTAAAATCCTCACCCACGAAAGAAAATCTGCCACCTCTTCCTGCGGCCCTTCCGTCGTCACCACCGTCGATACATCAATATACGGCGGAAGGTTGAGGTAG 654 0.5076 MSGASENPIDDSNEGKGSSFPSSSTRTLKLFGFPLTPPGYEEIHVAGSSTITPHCPYKRFKCHFCYREFANSQALGGHQNAHKRERQKAALSPLGYFHRHQRLTARNNPPVVVPYGGSGALVGPRGRGQRPWLMRDADEGPYHDHDHDRVRSVRPMGASAMSMSTVRECIRDNFLQLHINPKTHIKILTHERKSATSSCGPSVVTTVDTSIYGGRLR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01594 217 PANTHER ZINC FINGER PROTEIN 5 18 101 IPR044299 GO:0010090
Spst6g01594 217 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Spst6g01594 217 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Spst6g01594 217 MobiDBLite consensus disorder prediction 1 24 - -
Spst6g01594 217 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01594 Spst-Chr6 15089736 15093499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01594 26 105 C2H2 Transcription Factor Family AT5G06650 42.697 3.59e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01594 - - vun:114162545 216.083