Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01592 ATGCTCTTGCGATTTGCGTTTGACTTTGGCCACTCTCTTTTCTCCTTGTTGGTAGATTTGAATATTGATTGTCAGATTGGTTCTCTCAAAGGAGATTTACATAAGCAAAATATGAACCATGTAGTGGATTTAGCTGGTCTCATCTTCTGGCACGAGGCTTTGTTGTTGTGTCTTGAAGGTGTATTGCATGCTGCTTTGACAATGGGAGTTGAAAAAGAAGGGAAAAGTGGAGGAGGTTATGTTGGTGGCTTTTTCCAGTTGTTTGACTGGTCGTCAAAGTCCCGCAAGAAATTATTTGCAGCCAAGTCAGATTTACCAGAGAGTTTAAAACAGAGGAGAAGAGTCGATTACAATGTTTCAATGCCATTGACACAGTCCTCCTATCTGGTTGATGAAGATGAAAATGGAGTTGGGGCAAGTCTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAACATGTAGTACAAGGGCACCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTTCTTCAAGTTTTTCTGATCCTTATGCTACCCCATATTTTGATACCCGGTCCCTTCAAGATGCTCAGTACTTCAAAAAAAGCTTTGGTCAACAGCATGACCATCAGACCCCATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGGCTCATCCAGGAGCTTCATTGAGCCAAAGCCGCAAAAGGCCATTACCAGGCCAATTGAAAAGTTTCAAACAGAAGTATTGCCACCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAGTCCCAGTTTTGTTCCAACAAATAATGCTGCATATATAATGGAGGCTGCAGCAAGAATTATTGAGCCTGGTTCCCAAGCTAGTACCAAGGTTAAGATACCTCTGGTAGCATCATCAACACCACTGAGAGTCAGAGAGCTTAAAGATAAAGTGGAGGCTTCACAAAAAGGACCTCTATTTGGGCCAACCTCCATGAACTCTAGAACTCGAGATCTAAAAGAGAAAAGAGAACTTTCTCAAAGAACAACCAGGCTTTCTGAATCTTGTCAAAGAACAGTCGAGTCAAATGCTGCCAAGTATCTAAAAGGACAATCTTTGAACAGAAGCTGGAATGGTTCTGTGGATACATCCATCAAATCTCCTACACACGAGGAAGAAGTTTCTTCATTGAAGAATAAGGGGAAGTCCATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAAAAGGGAAGGTTTGAGTTTGACTGGTGGAAGAAGTATGATGGCCCGGAAAGAGCATCCTGACTTGAAATCCAACCAACCAATGAAGGCAAATGTTCAGAAAAATTTGCACAAGAAATCTTCTACTCAGAATTCATCCGGTGCTCTGAGACAGAATAATCTTAAACAGAATTATTGTATTGACAAAGACAAATTACCATCAAAGCCATTGGTGACTAATTCCCACAGTAGGAAAGTTATGACTGGGGATTCTTCTTTCGGACGTCATAGAAACTCCAGTAATAAATCCATTGCAAAATCTAAAGTTGGATCCAGAAAGTCAGCCATGGAGGTGACTGATAGTGAAAAGGAAGTTTTATACACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCGACAGACAAGGACTGGAATGATAGGGTTGTGGACAATTTGTTCATTGAAAAAACTCAGAGGCCTGCTAAGTCTAACCTAGTGAGTAATAAACAAAATAGTTGGGCTGACGATGTCAAAAAGAAAGACATGGATGTAGTTTCATTCACATTTACCACACCATTAACTAAGAGCAATACAGGTTTTGAGACATGTGGACACGCTGGCCAAAACAATAATGGTCTTTCCTTGGATCAGCGCATTAAAAGAGTGTTGCTCGACCCGGACAATACAAGGTCTCCAATAGGATACAATTTGATTGGTGGTGGTGATGCCTTAGGTGTCCTTTTGGAACAGAAATTGAGGGAACTAACATGTATGGAAACAACTTGTCATGACTCTTCTAAAGTGAGGCAGCCTGCCATTACTGCTACTATGTCAGATGTCCAAGTAACTGGCCTGAATGTAGTTAACCTCAATCCGACGTTGCAACAGAAAAAAGACCAAGATGTGTTATTTACGGACAAGTTAAGCAACAATTATAATTCAGACATCTCCTTCAGGGGTCTTCCTGAACTATCATTGAAGCGGAACTCATGGATTGATGAAATGGAACCACAGTCACTCAATTGCCGACACCCAAGTCCAATCTCTGTTCTTGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGGTCATCTGTTCAAGCTCAAGAAGTTCATGGGTTGAATTTTTCAAGGAAGTTCTATGCTTGTGAATCTGATGCCGAGTTATCCGATTCAGCTTCTTCAACCTCGGCTGGGAACATGATGAGGAGGCACACAAGTACTGTCACAAGGTTTGGAAGCTCAAGCACATGGGAGTTGGACTATGTGAAAGATATATTGTGTAATGTTGAGTTGATGTACATGGACTTTTCCCTTGGCCAAGCTAGCGAGGTTATAAACTCTCATCTATTCAAACAGTTGGAAGGCTGCAAGGTAGGGTTTAAGCGTGATGAGGAGTCTAGGATAAGAAGGAAAGTTACATATGATTGCGTGAGTGAATGTTTGGACTTGAGATGCAGGCGTTGTGTTGGAGGAGGATTCAAAATGTGGACCAAAGGGTTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGATGTGTACAAGGAGATCTCATGTTGGAGAGGAATGGGAGACTCAATGGTGGATGAGCTTGTGGACAAGGACATGAGCAGCCAACACGGAAGATGGCTAGATTATGAGGTTGATGCTTCTGAACTAGGATCAGAGGTTGTGGACCAAATATTTAATTCTTTGGTTGATGATGTTGTCACAGAAATATTGCAATTGTAA 3012 0.4107 MLLRFAFDFGHSLFSLLVDLNIDCQIGSLKGDLHKQNMNHVVDLAGLIFWHEALLLCLEGVLHAALTMGVEKEGKSGGGYVGGFFQLFDWSSKSRKKLFAAKSDLPESLKQRRRVDYNVSMPLTQSSYLVDEDENGVGASLRGSCDHSYASSVTDDETCSTRAPSVVARLMGLDSLPSSSFSDPYATPYFDTRSLQDAQYFKKSFGQQHDHQTPYSGKLVEKVEGSSRSFIEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSQASTKVKIPLVASSTPLRVRELKDKVEASQKGPLFGPTSMNSRTRDLKEKRELSQRTTRLSESCQRTVESNAAKYLKGQSLNRSWNGSVDTSIKSPTHEEEVSSLKNKGKSISLAIQAKVNVQKREGLSLTGGRSMMARKEHPDLKSNQPMKANVQKNLHKKSSTQNSSGALRQNNLKQNYCIDKDKLPSKPLVTNSHSRKVMTGDSSFGRHRNSSNKSIAKSKVGSRKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQRPAKSNLVSNKQNSWADDVKKKDMDVVSFTFTTPLTKSNTGFETCGHAGQNNNGLSLDQRIKRVLLDPDNTRSPIGYNLIGGGDALGVLLEQKLRELTCMETTCHDSSKVRQPAITATMSDVQVTGLNVVNLNPTLQQKKDQDVLFTDKLSNNYNSDISFRGLPELSLKRNSWIDEMEPQSLNCRHPSPISVLEPSFSIESCESSLSTDVTSTEGSKLWSSVQAQEVHGLNFSRKFYACESDAELSDSASSTSAGNMMRRHTSTVTRFGSSSTWELDYVKDILCNVELMYMDFSLGQASEVINSHLFKQLEGCKVGFKRDEESRIRRKVTYDCVSECLDLRCRRCVGGGFKMWTKGFEMVKRKEWLAEDVYKEISCWRGMGDSMVDELVDKDMSSQHGRWLDYEVDASELGSEVVDQIFNSLVDDVVTEILQL 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01592 1003 MobiDBLite consensus disorder prediction 381 401 - -
Spst6g01592 1003 MobiDBLite consensus disorder prediction 339 353 - -
Spst6g01592 1003 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 67 999 - -
Spst6g01592 1003 MobiDBLite consensus disorder prediction 450 477 - -
Spst6g01592 1003 MobiDBLite consensus disorder prediction 488 520 - -
Spst6g01592 1003 Pfam Domain of unknown function (DUF4378) 845 995 IPR025486 -
Spst6g01592 1003 MobiDBLite consensus disorder prediction 450 529 - -
Spst6g01592 1003 Pfam DUF761-associated sequence motif 151 182 IPR032795 -
Spst6g01592 1003 MobiDBLite consensus disorder prediction 326 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01592 Spst-Chr6 15080855 15085896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01592 82 1001 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.761 5.27e-86 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01592 - - gmx:100777900 1543.48