Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01586 ATGTTGGAAGTGATTCCTAAGCTGTGGATTAGAAACACGATGGCAAAGTCTAAGAATCACACAGCTCATAACCAGTCTTATAAGGCGCACAAAAATGGCATTAAGAAGCCTAAGAGACATCGCCACACTTCCACTAAAGGGATGGACCCTAAGTTTCTAAGGAATCAGAGGTATGCGAGGAAGCACAACAAGAAGAGTGGGGAAACTGCCACAGAGGAAGAGTAA 225 0.44 MLEVIPKLWIRNTMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEEE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01586 74 Gene3D - 14 74 - -
Spst6g01586 74 Pfam Ribosomal L29e protein family 16 55 IPR002673 GO:0003735|GO:0005840|GO:0006412
Spst6g01586 74 PANTHER 60S RIBOSOMAL PROTEIN L29 14 72 IPR002673 GO:0003735|GO:0005840|GO:0006412
Spst6g01586 74 MobiDBLite consensus disorder prediction 18 74 - -
Spst6g01586 74 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01586 Spst-Chr6 15006159 15007725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01586 14 74 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 9.46e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01586 K02905 - gmx:100777189 131.724