Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01554 ATGGAAGACTTGTACCATGTTAGTTTCAGTACAGTTGATGAAAATTCTAGTTCATTGAGTGATATATTCTGGGGCACCGAGGAACTGAGTGAAGTAAACAAGGTAAAATTTTCTAGATCAGAAGATCATGGGGTGTCTCGGGGAGAAGACTACTCTAACTTTGAGTTCTTCCCAGATTATTCATCAGAAGAAGGATACCTTTTGTCCACTAATCGAGAAAAGTATCACCAGCAACAATCATACCATGGTTATGGGCAACTGGATGATAGCCTTCTCTTTGACACGGTCTCTCCACGACTCCAATTTGATGCACAATATCCAGCCATGGTTCCATTGCGTGACACAACAAAGTACAAGCCACGCTCAACCACCCCTTTAGCCTCACTTGAGATCTTGAAGAACTATGGCAAGGGCTTCAAGAGGTTATCCAATGAAGGCAAATCCCAGCAGCCAGTAGTTGATGTGGCTGTGGCCACAAATGAAGTTGTTTCGGGAAAGCTTTCAACTGAAGATGTCATGAGGATAGCAGGAACAAGGTTCATCCAATCATCATCTTCAGAGTCAGAACCTTTGCCTTTCTTGGAAACTCATCCTCATGGTTCTTTTTTCTCTGGACTCTCTGATGAGGAGAAAGAGGATGTGGCACTTGCTGAGTCCCTCTTGGCTTCTGCTGAGAAAGTTGGTCATCAACAATTTGAACGTGGAAGCAAGTTGCTAAGTCATTGCGAATCATTGTCAAGCAAAACTGGGAGCCCCGTTAAGAGAATTGTTCATTGTTTTGCTGAAGCACTTCGCCACAGGATAGATAAAGAAACGGGAAGAGGTTCATCCAAGGATTTGCAAAAGGGTCAGTCATTTGATCCTGAAGAGGCAGCCAAGGAACTAAGCCCCACTATTGTTGCATTTTATGAAGAGCTTCCCTTTTGTCAAATTTCAGTGTTCACTGCAGTTCAAGCTATAATAGAAGACGTAGCTGAAGTAAAGAAGATTCATGTTATTGATCTTGAAATAAGAAAGGGGGGCCAATGGACTATCTTAATGCAAGCTCTTCAGTCAAGACATGGATGTCCAATCGAGCTTCTAAAGATAACCGCTATTGAAAGTGGAACCTCAAGACACATAGTAGAGGACACTGGTAAGAGATTGAAGGATTTTGCTCAAGGTTTGAACATTCCCTTCTCTTTCAACATTATTATGGTATCAGACCTATTACATCTCAGAGAAGCTCTTTTCGACATTGACCCTGAGGAAACAATTGCTGTTTATTCTGAGTTTGCACTTAGATCAAAGATTCAACAATCGGACCGGCTTGAAACCATCATGAGAGTGATTAGAACCTTGAATCCTAATGTGATGGTGGTAGCTGAAATTGAGGCAAACCACAACTCAATATCTTTTGTAAACCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGATTGTCTTGAGGCTTGCATGAAGGGGAATGAGATGAACCGAATGATTATAGAATCAATATACTTCAGTCATGGTATCAGGAACATTGTGGCCACAGAAGGAGCAGAAAGAAAGACTAGGAATGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAACTGAGCACTTTGTCTTTATACCAAGCACAATTAATGAGTAAGAGATTTCCTTGTGGAAGTTTTTGCACATTTGATAAGAATGGGCAGTGCCTTCTTGTTGGGTGGAAAGGAACACCAATTATTTCTGTTTCTGTCTGGAAATTCCTTTGA 1773 0.4157 MEDLYHVSFSTVDENSSSLSDIFWGTEELSEVNKVKFSRSEDHGVSRGEDYSNFEFFPDYSSEEGYLLSTNREKYHQQQSYHGYGQLDDSLLFDTVSPRLQFDAQYPAMVPLRDTTKYKPRSTTPLASLEILKNYGKGFKRLSNEGKSQQPVVDVAVATNEVVSGKLSTEDVMRIAGTRFIQSSSSESEPLPFLETHPHGSFFSGLSDEEKEDVALAESLLASAEKVGHQQFERGSKLLSHCESLSSKTGSPVKRIVHCFAEALRHRIDKETGRGSSKDLQKGQSFDPEEAAKELSPTIVAFYEELPFCQISVFTAVQAIIEDVAEVKKIHVIDLEIRKGGQWTILMQALQSRHGCPIELLKITAIESGTSRHIVEDTGKRLKDFAQGLNIPFSFNIIMVSDLLHLREALFDIDPEETIAVYSEFALRSKIQQSDRLETIMRVIRTLNPNVMVVAEIEANHNSISFVNRFIEALFFFSAFFDCLEACMKGNEMNRMIIESIYFSHGIRNIVATEGAERKTRNVKIDVWRAFFSRFGMVEKELSTLSLYQAQLMSKRFPCGSFCTFDKNGQCLLVGWKGTPIISVSVWKFL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01554 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 189 581 IPR005202 -
Spst6g01554 590 ProSiteProfiles GRAS family profile. 207 588 IPR005202 -
Spst6g01554 590 Pfam GRAS domain family 217 588 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01554 Spst-Chr6 14561546 14563318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01554 206 589 GRAS Transcription Factor Family AT3G03450 30.491 2.09e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst6g01554 GRAS 4.3e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01554 - - gmx:100818523 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01554 6 14561546 14563318 Spst6g01554 6 14561546 14563318 ECH