Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01552 ATGGAGAACCAGCAGGAAGTGATGGTTGTAGGAAAGGTATGTGAAATCTATGAGAAAATCTCCAAACTAGCAGACCTCAAACCCTCCAGCCATGTCAACGAACTCTTCACCCAACTTGTGACCATTTGCATCACCCCATGCCAAATAGATGTTTCTCAGCTGGGCCAACAGGTTAGAGAAACCATAGCAAAGCTAATTAGACTTTGTGGGAAAGCTGAGGGGCTTCTTGAGAACCACTACTCAACCCTGATAGGATCACATGAGAACCCTTTAAACCACTTGAAACTCTTCCCCTACTACTCCAATTACCTCAAACTAAGCCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAAGTTCCCTCCCATCTTGCCTTTGTGGGCTCAGGTCCCCTTCCTCTAACCTCAATCATGTTGGCCACCCATTACCTCCGGCACACATGCTTCCATAACTACGACATAGATCCCTTGGCAAATGCCAAGGCTCGTGGCTTGGTCTCATCGGACCCTGACTTGTCAAAGAGAATGTTCTTCCACACTAGTGACATTCTAAACGTGTCAAATGGCCTCAGGGACTATGACGTGGTCTTCTTGGCAGCACTTGTGGGCATGGACAATAAGGAGAAAGCACAAGTCATCAACCACTTAGCCAAGTTCATGGCACCAGGAGCTATTTTGTTGTTGAGGAGTGCACATGGTGCTAGAGCCTTCCTCTACCCGGTGGTTGATCCTTCTTCTGACCTCAAAGGTTTTGAAGTTCTCTCAGTTTTTCACCCCACTGATGAGGTTATTAACTCAGTTATTGTGACACGCAAGCATGTGGTGAATCAAGGGGCTTATTCAGCAGTTCTGGCTAGCAAATGTTCTGGAGTTGAAGGATTTAATCCCTTCAACCATGGGAATGTTATTGAGGAACTGACCGTTGAGGATCAAGCTTGA 942 0.4682 MENQQEVMVVGKVCEIYEKISKLADLKPSSHVNELFTQLVTICITPCQIDVSQLGQQVRETIAKLIRLCGKAEGLLENHYSTLIGSHENPLNHLKLFPYYSNYLKLSHLEFTMLTTHCTQVPSHLAFVGSGPLPLTSIMLATHYLRHTCFHNYDIDPLANAKARGLVSSDPDLSKRMFFHTSDILNVSNGLRDYDVVFLAALVGMDNKEKAQVINHLAKFMAPGAILLLRSAHGARAFLYPVVDPSSDLKGFEVLSVFHPTDEVINSVIVTRKHVVNQGAYSAVLASKCSGVEGFNPFNHGNVIEELTVEDQA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01552 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Spst6g01552 313 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
Spst6g01552 313 PANTHER NICOTIANAMINE SYNTHASE 3 3 289 IPR004298 GO:0030410|GO:0030418
Spst6g01552 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 233 IPR029063 -
Spst6g01552 313 Pfam Nicotianamine synthase protein 3 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01552 Spst-Chr6 14556196 14557137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01552 5 312 Nicotianamine Synthase Gene Family AT1G09240 54.603 7.71e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01552 K05953 - gmx:100814069 541.576