Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01548 ATGGGGTTTTGGTGGTCCTTGCTAGTTCTAGCACTCGCTTTCGCCATCTGCAAGTTCCTTCTCATTCTCATTCCTCCCAAGGTTCCTTCTATCGATGTCGACGCCTCCGATGTGTTGGACGATGGGAGCGAAACACCGGACGACTACATATATGTGCCTCCAAGGGGAACGACGCAGCAATCGAGCGGGAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATATTTGGGATTTGTTCCTTCGTTGACGCCTGATGAGGTTTGGTTAGAGTCACAGTCATGGGTGGAAGTAAGCCGAGTTGATTCTAACCCAGCAAAAACACAGTGCAATGACAAAGCACTTTTCATGCTCTTGCAGAGCTTACGTGACTTAATTGGTGTGTCCTTCCATGAGTTAGGCTCCTGCAATGCTGACAGTCTGTCAATCTTTGTTCCTGGTCGTCTCCTAACTTGCAATCTAAGCCTTTGCTCTCCATCATTATCTGCTGAAACTTGTCTGAGTGGTTTATCTTATTATCCGTACCTAACATCAGTTCCAAGAGAATCTATGTATTTTATATTAATATCTTCACGTGATACTGGAAAGACAATGGTAGATGCCTCTTTTGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTACTTGCAGAGGGAGAGAAATGCCTAAAACCTGAGTACCGGTCCTCTGGAAGAGCGATGTTTCATAAGAGAGCCAGAGTAGAATTTCATCCCCTTGGTGTTATCGGTGCCATTGTGTCATGGAACTATCCTTTTCACAATATTTTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGGATTGTGATTAAGGTGTCAGAACATGCTAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCTATAGGAGCTCCGGAGGACCTTGTTGAGGTGATAACAGGGTTTGGTGAAACAGGAGAAGCACTAGTATCTTCTGTTGACAAAGTCATTTTTGTTGGATCACCTGGGATCGGCAAGATGATAATGAGCAATGCTGCCGAGACACTTATACCAGTTACACTGGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGATCATGTAGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGGGCTGAGCGACTTTATGTCCACAGGAACATTTATGCATCCTTTGTCAGTAAAGTTACCAAAATTATAAAATCTGTTACAGCTATCAGCTTGTCTTACCTCTGTTATAGTCATGGCCCACCACTTTCTGGGAAGTATGATATGGGAGCTTTATGTATGCATGCACATTCTGAAAAGCTTGAAGGCCTTATAAATGATGCCTTAGACAAAGGAGCTGAAATTATTGCACGTGGAAGTTTTGGACATATAGGTGAAGGTGCAGTTGATCAATATTTCCCCCCTACAGTGATTGTGAATGTGAATCACTCAATGAGATTGATGCAGGAAGAGGCATTTGGACCAATCATGCCAATTATGAAATTTAGCATTGATGAAGAGGTTGTCAGGCTTGCAAATGATTCAAAATATGGGCTAGGGTGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCTAGAGAGATAGCTTCCCAGATACATTGTGGGATTGCTGCGATTAATGATTTTGGTGCAACATATATGTGTCAGTCCCTGCCATTTGGGGGTGTGAAACACAGTGGATTTGGGCGATTTGGAGGTATCGAAGGTTTGCGCGCATGCTGCCTTGTAAAAGCTGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCGTGATACCGAAGCCTCTTCAGTATCCTGTAGCAGAAAATGGATTTGAGTTCCAGGAGTCGCTTGTTGAAGCACTATTCGGACTCAGCGTATGGGACCGGTTGCAAGCATTGGTTAACGGGTTGAAAATGCTTAATGAGCAGAACACTACAAGTGGCAGCAGAAAAAATAAAGATGACTAA 1995 0.4366 MGFWWSLLVLALAFAICKFLLILIPPKVPSIDVDASDVLDDGSETPDDYIYVPPRGTTQQSSGKVQCYEPATMKYLGFVPSLTPDEVWLESQSWVEVSRVDSNPAKTQCNDKALFMLLQSLRDLIGVSFHELGSCNADSLSIFVPGRLLTCNLSLCSPSLSAETCLSGLSYYPYLTSVPRESMYFILISSRDTGKTMVDASFGEIMTTCEKINWLLAEGEKCLKPEYRSSGRAMFHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGETGEALVSSVDKVIFVGSPGIGKMIMSNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERLYVHRNIYASFVSKVTKIIKSVTAISLSYLCYSHGPPLSGKYDMGALCMHAHSEKLEGLINDALDKGAEIIARGSFGHIGEGAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSIDEEVVRLANDSKYGLGCAVFSGSQSRAREIASQIHCGIAAINDFGATYMCQSLPFGGVKHSGFGRFGGIEGLRACCLVKAVVEDRWWPFIKTVIPKPLQYPVAENGFEFQESLVEALFGLSVWDRLQALVNGLKMLNEQNTTSGSRKNKDD 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01548 664 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 180 594 - -
Spst6g01548 664 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 354 361 IPR029510 GO:0016491
Spst6g01548 664 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 382 393 IPR016160 GO:0016491
Spst6g01548 664 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 362 567 IPR016163 GO:0016620
Spst6g01548 664 Pfam Aldehyde dehydrogenase family 185 594 IPR015590 GO:0016491
Spst6g01548 664 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 186 592 IPR016162 GO:0016491
Spst6g01548 664 SUPERFAMILY ALDH-like 184 596 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01548 Spst-Chr6 14516030 14523047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01548 1 661 Aldehyde Dehydrogenase Gene Family AT3G66658 65.913 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01548 - - aprc:113848242 946.036