Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01546 ATGATTTCCACTCCCACTGCCTCACTTGCTTCATTTAGCCAAAGAGAAGGAATGGTTGACCGTACAAGGAGCAATGTTCTTATAAGAGAATATAATGAAGATAAAGATGTTAAAATGGTGAGAAAGCTAGAGAGGAACTGTGAGATTGGGACTGAAAAGCTGGTCTCCACTTTTACCAACATGATGGGTGACCCTTTATCTAGGATTAGGCTTTTCCCCCTTCATGTAATGCTGGTAGCTGAGCTTCTTGAGAGCAGGGAACTTGTTGGAGTGGTTAGGGGAGTCATTAAGAACGTGGGGACTCTTTCTGGATCTCTCTTGAAGATGGGTTACATCCTAGGCCTCAGAGTAACTCCTACGTACAGGAGAAAGGGGGTTGCACTAAGACTTGTCACTGCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCCTAGCCACTGAAAAGGATAATGATGCTTCTAAAAACCTATTCACACTCAAAGGCAATTATGTGAACCTTGGCTCACTTGTCATATTTGTGCAACCAACTAGTGCCCTCACAAAGCATATTTCCAGGGATATAAAAATAGAGAAAGTGGACATAGATCTAGCAATTTCATTATACAGAAGAATCTTGAGGACCAAAGATTTGTATCCACTAGACATGGACGTAATTCTGAAGGAGAAACTCAGCGTAGGCACATGGGTAAGTTATTACAAAAAGGAGGGTTGGCTCAATTTGCGAAGCAAGGTAAACAATGAAGAACTTCTTAGCAATGAAACTTCAAGCTCATGGGTCATTTTTAGTATATGGAACACTTGTGAAGCTTACAAGCTTCAAGTTACAAAGTCTCAACTACTAAGGTTTCTTCTTACAACCTTAAATCATGCAAGAGAGAAAGTTTTCCCTTGTCTCAAAATGTCGGTGAGTGACTCACTTTGTAGATCCTTTGGGTTTCTCTTTCTTTATGGAATTCATGGACAGGGAGAGAACCTTGGAGAGCTCTTGGAATCCATGTGGAAATTCACATCAAGAGTGGGAGAAGGAATGAGGGACTGTAGGGTGGTCATAACTGAGTTAGGGTTTGGTGATCCACTTGCCGACCATGTTCATCAAACAGATTCCATCTCATGTATCGATGATCTATGGTACATTAAGAGACTTTCAAGCCACGTTGATGAAAAGGTTGATGAAATGTTGATGAGACAAGTGGGAAATGTGTTTGTTGACCCTAGAGATTTTTAG 1236 0.411 MISTPTASLASFSQREGMVDRTRSNVLIREYNEDKDVKMVRKLERNCEIGTEKLVSTFTNMMGDPLSRIRLFPLHVMLVAELLESRELVGVVRGVIKNVGTLSGSLLKMGYILGLRVTPTYRRKGVALRLVTAVEEWMVRNGAEYAFLATEKDNDASKNLFTLKGNYVNLGSLVIFVQPTSALTKHISRDIKIEKVDIDLAISLYRRILRTKDLYPLDMDVILKEKLSVGTWVSYYKKEGWLNLRSKVNNEELLSNETSSSWVIFSIWNTCEAYKLQVTKSQLLRFLLTTLNHAREKVFPCLKMSVSDSLCRSFGFLFLYGIHGQGENLGELLESMWKFTSRVGEGMRDCRVVITELGFGDPLADHVHQTDSISCIDDLWYIKRLSSHVDEKVDEMLMRQVGNVFVDPRDF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01546 411 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 411 - -
Spst6g01546 411 Pfam Acetyltransferase (GNAT) family 80 162 IPR000182 GO:0016747
Spst6g01546 411 CDD NAT_SF 77 148 - -
Spst6g01546 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 26 228 IPR000182 GO:0016747
Spst6g01546 411 Gene3D - 27 178 - -
Spst6g01546 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 161 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01546 Spst-Chr6 14507086 14508829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst6g01546 Acetyltransf_1 4.3e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01546 - - vra:106754018 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01546 6 14507086 14508829 Spst6g01546 6 14507086 14508829 ECH
Spst3g02953 3 79203939 79205507 Spst6g01546 6 14507086 14508829 PCT