Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01535 ATGGCTAATTTTCCTTCATGCTCTTCTTTTCTCCTTTCATCATTCATGCTGGCAATTCTCATTTCTTGCATCTCACATTCTGCCCTTGCCATTGATGGACATACAGTCGCTAACTCTCCTATGTTGACCACAAAGTTAGGAATTAATCGCACAATCATAGTAGATGTCAACGGCAATGGGGATTTCAAGAGTGTTCAAGATGCCATAGATTCCATTCCCGAAAATAATTCTAATTGGGTAATTGTTCATCTTAGGAGAGGAGCATACAGAGAACAAGTGCACATACCATCGAGTAAGCCTTATATATTCATGAGAGGGAATGGCAGAGGAAAAACTGCTGTAGTTTGGTCTGAGAGCTCTTCAGACAACGTGGCTTCTGCCACCTTCAGAGTCGAAGCACATGATTTCATTGCCTTTGGAATTAGCTTCATGAATGAGGCACCTACGGGGATTGCTTATACCTCGCAAAACCAATCAGTGGCAGCATATGTGGCAGCAGAAAAACAACCTGAAATATTTGTGATAGATGATAAAAGGTTAACGATTCAAGGTTCAATCACCGCGCACAACAGGGAAAATGCAGACGAGCTGAATGGGTATGTCTTCATCAAAGGGTCGGTTTATGGCATTGGTTCAGTTTACCTAGGAAGGGCCAAGGGTCCTTATTCTAGGGTGATTTTTGCTGAGACGTATCTCTCCAAGACCATTGTCCCACAGGGGTGGACCAATTGGAGCTATGATGGTAGCACAGAGTAA 756 0.4312 MANFPSCSSFLLSSFMLAILISCISHSALAIDGHTVANSPMLTTKLGINRTIIVDVNGNGDFKSVQDAIDSIPENNSNWVIVHLRRGAYREQVHIPSSKPYIFMRGNGRGKTAVVWSESSSDNVASATFRVEAHDFIAFGISFMNEAPTGIAYTSQNQSVAAYVAAEKQPEIFVIDDKRLTIQGSITAHNRENADELNGYVFIKGSVYGIGSVYLGRAKGPYSRVIFAETYLSKTIVPQGWTNWSYDGSTE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01535 251 Gene3D - 46 169 IPR012334 -
Spst6g01535 251 SUPERFAMILY Pectin lyase-like 48 248 IPR011050 -
Spst6g01535 251 Pfam Pectinesterase 52 166 IPR000070 GO:0030599|GO:0042545
Spst6g01535 251 Pfam Pectinesterase 183 247 IPR000070 GO:0030599|GO:0042545
Spst6g01535 251 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 182 247 - -
Spst6g01535 251 Gene3D - 170 251 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01535 Spst-Chr6 14428737 14429916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01535 49 246 Carbohydrate Esterase AT5G47500 31.855 1.91e-35 127