Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01532 ATGCACCAGGCATTGATGAGTATTATCGCGCGATGTTGGAAGCCGTTCGGGCAAGGTGACGACGCCAATGCTGGAAGAGAATGCAAGGACGGCCTCCTCTGGTTCCGCGACATCGGAAGGTTTGCCGCCGGCGATTTCTCCATGGCCGTCGTTCAGGCTAATCAGGTACTCGAGGACCAGAGCCAGATCGAGTCCGGACCCTTCGGCACCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCTGATTGCTCGCGATACGTTTGCGATAACTTGTTCCGTAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAACAAGCGTTTCGGCGGACTGAGGAGGGGTTCACGGCGCTTGTTTCAGAGTTGTGGAACTCCCGGCCGCAGATTGCGACCACTGGGACATGTTGTTTGGTTGGGGTTATTTGTCGGCAGACGCTGTTTGTGGCGAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTTGGTAACACTGGTGGGATGGCTGCGATTCAGCTGTCCACGGAGCACAATGCGAATGTTGAGGCTGTTAGGCAGGAGCTTAAGGAATTGCACCCGGATGACCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAGGGAATAATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGGGAACCCATTAATGCGAAATTCAGACTCCCCGAACCAATGAACATGCCATTCTTGTCTGCTAATCCGACTATTATTTCTCATCCAATCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGATCAAGCAGTGGATATTGTTCACAGCAGTCCACGTGCGGGTAGTGCCAAGAAACTTATTAAGGCTGCCCTACACGAAGCAGCAAGAAAACGTGAAATGCGATATTCAGACCTTTATAAGATTGACAAGAAAGTTCGTCGCCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCATGACCTTGTATCGAGAGGCGCAGTTCTAAATTCGCCGCTCACAGTTCGAAGTGCGCTCGATCACTGA 1110 0.4973 MHQALMSIIARCWKPFGQGDDANAGRECKDGLLWFRDIGRFAAGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTALVSELWNSRPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANVEAVRQELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMNMPFLSANPTIISHPIQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPRAGSAKKLIKAALHEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHDLVSRGAVLNSPLTVRSALDH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01532 369 PANTHER PROTEIN PHOSPHATASE 43 344 IPR015655 GO:0004722|GO:0006470
Spst6g01532 369 FunFam Probable protein phosphatase 2C 42 36 354 - -
Spst6g01532 369 SUPERFAMILY PP2C-like 54 347 IPR036457 -
Spst6g01532 369 Pfam Protein phosphatase 2C 70 316 IPR001932 -
Spst6g01532 369 ProSiteProfiles PPM-type phosphatase domain profile. 45 346 IPR001932 -
Spst6g01532 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Spst6g01532 369 SMART PP2C_4 39 344 IPR001932 -
Spst6g01532 369 CDD PP2Cc 46 346 IPR001932 -
Spst6g01532 369 Gene3D - 39 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01532 Spst-Chr6 14394234 14399520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01532 1 366 PP2C-type Phosphatase Gene Family AT4G38520 59.416 4.76e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01532 K01102 - gmx:100814799 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01532 6 14394234 14399520 Spst6g01532 6 14394234 14399520 ECH
Spst3g02940 3 79064118 79067777 Spst6g01532 6 14394234 14399520 PCT