Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01497 ATGGCGATGATCGTGAGTCAGAACATGGTAACAGAGGCGGAAATTATTTGCCAGAAGAGCATTCCGATGCTGGACGTGAAGTATCACCTTCGCATGGCGCAAGAACATGGCGTTAATGTCGAGGTTTCACCCACCTCCAATGCCGTTCCCATTTTCGGCCACGTGAGGGTTGCCGCTGAATCGGTTTCTACGGAAACGACTCGTTTTGAATCGGTTGTGAGTTGCCCTGAGATGACTGAAGATTCCATTTTAGAGGCTCCTGATTCTAAGTTTACACCAAATGTTCGATCTGGTTGCTGTGCTGATATTGGACCCAGGGGATCTATGGATGATGAGCACATTCGGATAGATGATCTAGCTACCCACCTCGGGTTCGTCTTTGATCATCCTATGGCAAATGCATTTTATGCAGTTTTTGACGGGCATGGAGGCCCTGATGCAGCTGCCTTTCTTAAAAACAATGCTATGAGATTATTTTTCGACGATGCTGATATGCTGCAATCATATGATGCTGATGCACTTTTTCTGAAGAGGTTGGAAGATTCTCATAAAAAGGCATTTTTGGGAGCAGACCTTGCCTTGGCTGATGAACAAAGTGTTAGTAGTTCCTGTGGAACAACGGCGTTGACTGCTCTTGTAATTGGAAGGCATTTGATGGTTGCTAATGCTGGGGACTGTAGAGCTGTTCTTTGTAAGCGAGGAGTAGCGGTTGAAATGTCCCAGGATCACAGACCAAGTTATTTACAAGAACGCAGGAGAGTGGAGGAGATGGGTGGTTTCATTGATGATGGGTATCTCAATGGTTATCTTTCTGTTACTCGTGCCCTTGGGGATTGGGACTTGAAATTTCCACTTGGTTCTGGGTCGCCTCTCATTGCTGACCCGGATGTTCAGGTGGTCACATTGACAGAGGAGGATGAGTTTTTGATCATTGGTTGTGATGGTATATGGGATGTGATGTCAAGCCAGGACGCTGTTAGTCTTGTTCGGCGTGGGTTAAGAAGGCATGATGACCCTCAACAATGTGCCACAGAGCTAGTTAAGGAAGCATTGCGCCTACACTCATCAGATAATCTTACTGTGATTGTTATTTGCTTGTCCCCTGTCCAGAGTATTGTCCAATCATGTCCACCCCACATGCGAAGATTCAGATCTTGCTCATTATCTGAAGAGGCTCGTAACAAATTGAGAAACTTGTTAGAGGGAAATTAA 1212 0.4571 MAMIVSQNMVTEAEIICQKSIPMLDVKYHLRMAQEHGVNVEVSPTSNAVPIFGHVRVAAESVSTETTRFESVVSCPEMTEDSILEAPDSKFTPNVRSGCCADIGPRGSMDDEHIRIDDLATHLGFVFDHPMANAFYAVFDGHGGPDAAAFLKNNAMRLFFDDADMLQSYDADALFLKRLEDSHKKAFLGADLALADEQSVSSSCGTTALTALVIGRHLMVANAGDCRAVLCKRGVAVEMSQDHRPSYLQERRRVEEMGGFIDDGYLNGYLSVTRALGDWDLKFPLGSGSPLIADPDVQVVTLTEEDEFLIIGCDGIWDVMSSQDAVSLVRRGLRRHDDPQQCATELVKEALRLHSSDNLTVIVICLSPVQSIVQSCPPHMRRFRSCSLSEEARNKLRNLLEGN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01497 403 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Spst6g01497 403 Pfam Protein phosphatase 2C 106 358 IPR001932 -
Spst6g01497 403 PANTHER PROTEIN PHOSPHATASE 2C 80 364 IPR015655 GO:0004722|GO:0006470
Spst6g01497 403 SMART PP2C_4 86 364 IPR001932 -
Spst6g01497 403 Gene3D - 78 370 IPR036457 -
Spst6g01497 403 ProSiteProfiles PPM-type phosphatase domain profile. 96 366 IPR001932 -
Spst6g01497 403 SUPERFAMILY PP2C-like 90 368 IPR036457 -
Spst6g01497 403 CDD PP2Cc 95 366 IPR001932 -
Spst6g01497 403 SMART PP2C_SIG_2 111 366 IPR001932 -
Spst6g01497 403 FunFam Probable protein phosphatase 2C 22 80 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01497 Spst-Chr6 14045137 14046981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01497 3 402 PP2C-type Phosphatase Gene Family AT1G48040 56.716 3.10e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01497 K14803 - gmx:100798957 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01497 6 14045137 14046981 Spst6g01497 6 14045137 14046981 ECH
Spst3g02898 3 78606856 78608458 Spst6g01497 6 14045137 14046981 PCT