Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01478 ATGTTGATCATGGAGGGTAGTTCAAAGTGGTTAGTGTATTGTGCTGGTGCTCTTCTAGTCCTAAGGTTCATTCTCAGGAATGTAAACTGGTTTCTGTATGAATACAAACTGGGTGGGAAGCAATACTTTCTTCCCCCTGGTGACATGGGGTGGCCCATAATCGGCAACATGTGGTCCTTCCTCCGTGCCTTCAAGACCATTAACCCTGAATCCTTCATGGACTCCTTTTACTCCAGGTATGGAAAGACTGGGATATACAAGGTGTTGATGTTTGGAAATCCGAGTGTAATAGTGACAACACCAGAAGCATGCAAAAGGGTGTTGACAGATGATGACAACTTCTGTCTTGGATGGCCTCGTTCCACTGTGGAACTCATGGGAGAGAAGTCTTTTATCGCAATACCTTTCGAAGAACATAGACGCCTTAGGCGCTTAACATCTGCTTCAATCAATGGCTATGAAGCACTCTCTTGTTACATCAAATATATTGAAGAAGTTGTCATAAGTTCATTGGAGAAATGGACCACCATGGGGGACATTGAGTTTTTGACTCAGATGCGCAAGCTCACTTTCAAAATCATTATACATATTTTTCTTGGTGCAGAAAGTGAAGATGTTATGGAGAATTTGGAAAAAGAATACACTAAACTTAATTATGGAGTTAGAGCCATGCGAATTAACCTTCCTGGATTCGCATTCCATAAAGCACTCAAGGCCAGGAAAAATCTACTTGCCATATTTCAATCTGTTGTGGATAAACGAAGAAATGAAAGGAGGGAAAGATTACCTGGCAAAAAGGCCAAAGATATGATGGATGCTCTGATAGATGTTGAAGATGAAAATGGAAAAAAATTGGGTGACGATGACGTGATCGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCCTCAGGACATATTACCACGTGGGCAACCTATTTCCTCCAAAGGCATCCAGAACATTTCAAGAAGGCTAAGGAAGAACAAGAAAAAATTATAAGGAACAGGCCTCCAACTCAGAAAGGGTTATCACTAGCTGAAGTTCGGAAGATGGAATACCTTTCCAAGGTGGTTGATGAAACACTGCGGGTGGTCACATTCTCACTAATGGTCTTTCGAGAGGCAAAAGCTGATGTCAATATCAATGGTTACCTGATTCCAAAAGGTTGGAAAGTAATGGCCTGGTTCAGGTCTGTTCACCTTGATCCCGAGATATATCCTAATCCAAAGGAGTTTAATCCGGAGAGATGGAATGAGGTGCGCAAGGCTGGAGAATTTCTTCCTTTTGGAGCAGGAACTAGACTGTGTCCTGGGAATGATCTTGCCAAGCTGGAAATCTCAGTTTTCCTTCATCATTTTCTGCTGAATTACGAGCTTGAACAGCTTAATCCACTTGCCCCTCTGCAATTCCTACCTCACACAAGGCCCATTGACAACTGCATGGCAAGAATCAAGAAAGTGAAGTAA 1470 0.4218 MLIMEGSSKWLVYCAGALLVLRFILRNVNWFLYEYKLGGKQYFLPPGDMGWPIIGNMWSFLRAFKTINPESFMDSFYSRYGKTGIYKVLMFGNPSVIVTTPEACKRVLTDDDNFCLGWPRSTVELMGEKSFIAIPFEEHRRLRRLTSASINGYEALSCYIKYIEEVVISSLEKWTTMGDIEFLTQMRKLTFKIIIHIFLGAESEDVMENLEKEYTKLNYGVRAMRINLPGFAFHKALKARKNLLAIFQSVVDKRRNERRERLPGKKAKDMMDALIDVEDENGKKLGDDDVIDIMLMYLNAGHESSGHITTWATYFLQRHPEHFKKAKEEQEKIIRNRPPTQKGLSLAEVRKMEYLSKVVDETLRVVTFSLMVFREAKADVNINGYLIPKGWKVMAWFRSVHLDPEIYPNPKEFNPERWNEVRKAGEFLPFGAGTRLCPGNDLAKLEISVFLHHFLLNYELEQLNPLAPLQFLPHTRPIDNCMARIKKVK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01478 489 Pfam Cytochrome P450 45 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 Gene3D Cytochrome P450 37 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PANTHER CYTOCHROME P450 26 41 475 - -
Spst6g01478 489 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Spst6g01478 489 SUPERFAMILY Cytochrome P450 42 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 CDD CYP90-like 77 487 - -
Spst6g01478 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01478 489 FunFam Ent-kaurenoic acid oxidase 35 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01478 Spst-Chr6 13855023 13859099 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01478 10 488 Cytochrome P450 AT2G32440 64.375 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01478 K04123 - gmx:100781238 763.837