Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01476 ATGATGATGATGATGGAGATGGGATCCATGTGGGTGGTCCTTCTGGTTGTGGCCATTGCTGGTGCTCTTTTTATCCTAAGATCCACCCTCAAGAATGTAAATTGGTGGCTCTATGAATCCAAATTGGGTGTGAAGCAGTACTCTCTGCCCCCAGGTGACATGGGTTGGCCCTTCATTGGCAACATGTGGTCCTTTCTCAGAGCTTTCAAGTCCAAGGACCCTGATTCCTTCATCTTGTCCTTTGTCTCCAGATTTGGACGAACTGGAATGTACAAGACCTTGATGTTTGGAAACCCGAGTGTAATTATGACAACACCTGAAACATGCAGAAGGGTGTTGACAGATGATGATAAATTCACTAATGGTTGGCCTCGTTCTACGATAGAGCTCATTGGAAAGAGGTCATTTATTTCAATGTCTGTGGAAGAACACAAGCGCCTTAGGCGTTTGACAGCCTCTTCAATCAATGGCATGGAAGCACTGTCCCTTTACTTGTCATATATTGAGAAAAATGTGAAAACTTCACTGGAGAAATGGGCCAACCTGGGACAAATTGAGTTTTTAACTGAGATCAGGAAGCTTACTTTCACAATCATCATGCATATTTTCATTAGCTCAGAAAGTGAACCTGTTATGGAGGCTTTGGAGAGGGAATACACAGCACTTAATTATGGAATTAGAGCCATGCGGATTAATATTCCTGGATTTGCATACCACAAGGCGTTCAAGGCAAGGAAAAATCTAGTGGCAATATTTCAATCTATTGTGGACGAGAGAAGAGACATAAGGAAGGCATATTTGCCTGGAAAAGGCAAAGATATGATGGATGCTCTGATAGATGTTGCTGATGATGATGGAAGAAAGTTAACAGATGAGGACATCATTGATATCATGTTAATGTACTTGAATGCGGGCCACGAGTCTTCGGGACACATTACAATGTGGGCAACCTTCTTCCTGCAAAAGCACCCAGAATATTTGCAGAAGGCTAAGGAAGAACAAGAAGAAATTGTGAGGAGAAGGCCTCCAACACAGAAAGGGTTGACACTGAAGGAAGTTCGGGAGATGGATTTTCTTTACAAGGTTATCGATGAAACAATGCGTGTGATTACATTCTCATTAGTGGTCTTTCGGGAGGCAAAATCTGATGTCAATATCAATGGCTACACAATTCCAAAAGGTTGGAAAGCACTAGTGTGGTTCAGATCAGTTCACCTTGATCCAGAAATATATCCTAATCCAAAGGAATTTAACCCTTGTAGATGGAATAAAGAACACAAGGCCGGAGAATTCCTTCCCTTTGGAGGAGGAACTAGATTGTGCCCTGGGAATGATCTTGCCAAGATGGAAATAGCAGTTTTTCTTCATCATTTCCTTCTGAATTACCGGTTTGAACAGAAAGATCCTAACTGTCCTGTGAGATACTTACCACATACAAGACCCATTGACAATTGCTTGGGAAGGGTCAGAAAATGTTCATCTACAACAACCTAA 1494 0.4203 MMMMMEMGSMWVVLLVVAIAGALFILRSTLKNVNWWLYESKLGVKQYSLPPGDMGWPFIGNMWSFLRAFKSKDPDSFILSFVSRFGRTGMYKTLMFGNPSVIMTTPETCRRVLTDDDKFTNGWPRSTIELIGKRSFISMSVEEHKRLRRLTASSINGMEALSLYLSYIEKNVKTSLEKWANLGQIEFLTEIRKLTFTIIMHIFISSESEPVMEALEREYTALNYGIRAMRINIPGFAYHKAFKARKNLVAIFQSIVDERRDIRKAYLPGKGKDMMDALIDVADDDGRKLTDEDIIDIMLMYLNAGHESSGHITMWATFFLQKHPEYLQKAKEEQEEIVRRRPPTQKGLTLKEVREMDFLYKVIDETMRVITFSLVVFREAKSDVNINGYTIPKGWKALVWFRSVHLDPEIYPNPKEFNPCRWNKEHKAGEFLPFGGGTRLCPGNDLAKMEIAVFLHHFLLNYRFEQKDPNCPVRYLPHTRPIDNCLGRVRKCSSTTT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01476 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Spst6g01476 497 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 SUPERFAMILY Cytochrome P450 45 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 CDD CYP90-like 82 489 - -
Spst6g01476 497 FunFam Ent-kaurenoic acid oxidase 40 492 - -
Spst6g01476 497 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 PANTHER CYTOCHROME P450 26 46 477 - -
Spst6g01476 497 Gene3D Cytochrome P450 39 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01476 497 Pfam Cytochrome P450 50 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01476 Spst-Chr6 13824067 13829370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01476 10 491 Cytochrome P450 AT2G32440 65.839 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01476 K04123 - gmx:100781238 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01476 6 13824067 13829370 Spst6g01476 6 13824067 13829370 ECH