Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01444 ATGGATTTTGCCATGGGAGGTGCAGGTGGATCTGGAGATGATCAACACAATCCCAACCGCAATCAGAGTCACAATCAGAACTCAAACAAAGGAAAAAAGGCCTACCATGGTCACAACGCTGATAGAACATCTAAGCTTGAAGATATCATTCGCACTGAGAATGAAAGAATACGTAAAGATAACCTCATATTGAAGGAGGCATTGAAAAATATGATGTGTTCATCTTGTGGGGGTCCATCTAATGTCGATGAAAGGCGTCAACGTTCTCTGGAACAACTTCGTCTTGAAAATGCTCGTCTTAAAGAGGAGCATGAGAAGGTGTCTAGTGTTCTTGCAAAGTACATGGATAAACCAATCTTAGAACTAAACATGGAGTCCTCTCTTAAGAGGGGATCTTCATCACGTTGTCCATTGCCAGAAAGTTTTCTAAAACTAGGAACTTTAAGAGGTGCTCGTGTGAATCTAGGTGGCTCAATAAGTCGTTCATTTGAGAATGAACATACCATGCCCAACCCTGGGAGAAAAATAACACAAATGGAAAAGGCAATGATGTCACATATTGCAGTGGCTGCTAAGGAAGAATTACTTAAGCTTTTGTGCACCAATGAGCCCATATGGGTCAAATCTTCAAATAGTCAGAGATATGTTCTTCATCTTGAAAGCTACGAAACATTCTTTCCAAGGATTAATCACTTCAAGAATTCCCAAGCTCGTGTGGAATCATCAAAAGATTCACGAGTTGTCAGAATTAAGGCAATGGAATTAGTTGACATGTTTTTGAATTCGGAAAAATGGGCAAATATTTTCTCAACAATTGTTACAAAAGCGCGAACAATCGAAGTACTTGAAAATGGTTCATTTGAAAATCGAAGTGGAGTTTTGTTGTTGATGAGTGAAGAGATGCATGTTCTTTCACCATTAGTTCCATCCCGGGAATTGTGCTTCCTTCGCTACTGTCAACAAGTTGAAGCACATTCATGGGTGATAGTAGATGTTTCCGTTGACTGCACGAGGGGGGATAATAATGATCCTAAATATTGGAGGTTTCCTTCTGGATGCATGATTCATGAAGTTTCTAATGACTTGTGTTGGATTTCTTGGGTCGAACATGTGGAAGTGGATGAGAAGATAAAAACGCATGAACTATACAAAGATCTCGTTAACAACAACATTGCATATGGAGCAGAAAGATGGCTTTTGGAACTTCAAAGAACGTGCGAAAGATTTATCAGTGTTCGAGCAGAATGCACACCTAATTATGACATCAATGGAGTGATCACTACTCTTGGAGGAAGGAAAAGAATGATGAAGTTTTCTCATGAAATGGTGAAAAACTTCCATGAAATTTTAAACATGACAAATAAGACAGACTTCCTCGAACATTTGGCTGAGGAGAGTACTGGGATTAGGATTGCTGCTCGGAAATACAGAAACTCAAGCCAATCAAATGTCATGATTATATTCATTGCAACAACCTCTTTTTGGCTTCCACTCCCTTCAGAAAACGTTTTTGACTTCTTCAGAGATCCAATAAGCCGTGCAAAGTGGGATGTTATGTGTTATGAGAGTCCCGTGCAAGAGATTGCTCGTGTCTCTGTTGGAACTCATCCTAGCAACTATGTATCAATTATTCAGGTAAACGAATGTCTGCTTTGA 1656 0.3955 MDFAMGGAGGSGDDQHNPNRNQSHNQNSNKGKKAYHGHNADRTSKLEDIIRTENERIRKDNLILKEALKNMMCSSCGGPSNVDERRQRSLEQLRLENARLKEEHEKVSSVLAKYMDKPILELNMESSLKRGSSSRCPLPESFLKLGTLRGARVNLGGSISRSFENEHTMPNPGRKITQMEKAMMSHIAVAAKEELLKLLCTNEPIWVKSSNSQRYVLHLESYETFFPRINHFKNSQARVESSKDSRVVRIKAMELVDMFLNSEKWANIFSTIVTKARTIEVLENGSFENRSGVLLLMSEEMHVLSPLVPSRELCFLRYCQQVEAHSWVIVDVSVDCTRGDNNDPKYWRFPSGCMIHEVSNDLCWISWVEHVEVDEKIKTHELYKDLVNNNIAYGAERWLLELQRTCERFISVRAECTPNYDINGVITTLGGRKRMMKFSHEMVKNFHEILNMTNKTDFLEHLAEESTGIRIAARKYRNSSQSNVMIIFIATTSFWLPLPSENVFDFFRDPISRAKWDVMCYESPVQEIARVSVGTHPSNYVSIIQVNECLL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01444 551 Gene3D - 184 393 IPR023393 -
Spst6g01444 551 SUPERFAMILY Bet v1-like 178 409 - -
Spst6g01444 551 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 47 547 IPR042160 -
Spst6g01444 551 MobiDBLite consensus disorder prediction 1 47 - -
Spst6g01444 551 Coils Coil 83 117 - -
Spst6g01444 551 SUPERFAMILY Bet v1-like 432 527 - -
Spst6g01444 551 MobiDBLite consensus disorder prediction 14 33 - -
Spst6g01444 551 CDD START_ArGLABRA2_like 181 407 - -
Spst6g01444 551 Pfam START domain 187 408 IPR002913 GO:0008289
Spst6g01444 551 ProSiteProfiles START domain profile. 177 411 IPR002913 GO:0008289
Spst6g01444 551 SMART START_1 186 408 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01444 Spst-Chr6 13424504 13428820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01444 26 545 Homeobox Transcription Factor Family AT1G73360 38.577 3.97e-121 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01444 K09338 - gmx:100794552 711.449