Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01433 ATGGCACTTTCTATGCACAAGGACTCAGCCAACAGCCAGATGGATTCAAGCAAGTATGTGAGGTACACACCTGAGCAGGTCGAGGCTTTGGAGAGGGTCTATGCCGAGTGCCCTAAGCCAAGTTCTTTGCGGAGGCAGCAACTCATCAGAGAGTGCCCCATCCTTTCCAATATTGAACCCAAACAAATTAAAGTTTGGTTTCAGAACAGAAGGTGTCGTGAGAAGCAGAGGAAGGAAGCTTCTCGGCTGCAGACAGTGAACAGAAAGCTGACTGCGATGAACAAGCTGTTAATGGAAGAGAATGACCGTTTGCAGAAGCAGGTTTCTCATCTCGTTTACGAGAATGGATTTATGAAGCAACAGATACAAACTGCCTCTGCTGGCACCACCACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGAATCAACAGCAAAACCCAACTCCTCAGCATCCCAACAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCAGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCGATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGGGTGGCAGCACGAGCCTGCGGCCTTGTGAGTCTAGAACCCACTAAGGTTGCTGAGATTCTTAAAGATCGGCAGTCGTGGTATCGTGACTGCCGTTGCGTGGACGTGTTGAGTATAGTCCCCACAGGAAATGGGGGCACCATTGAGCTCATGTACATGCAGACATATGCTCCCACGACATTGGCAGCTGCACGGGACTTTTGGACACTGAGATACACGACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCGTTGACATCCTCGACTGGTGGCCCCACAGGGCCTCCTTCTACAACCTTCGTAAGAGCTGAAATGCTTCCCAGTGGTTATCTCATTAGACCTTGTGAGGGTGGTGGATCCATTATTCACATAGTTGATCATATTGATTTAGATGTATGGAGTGTCCCTGAAGTACTGAGGCCCCTGTACGAATCATCAAAAATCTTGGCTCAGAAATTGACCATTGCTGCCCTGCAACATATAAGACAGATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGGGGACGTCAGCCTGCTGTATTGAGAACATTTAGTCAGAGACTTTGCAGGGGCTTTAATGATGCTGTGAATGGGTTTGTTGATGATGGTTGGTCGCTGATGGGTACTGACGGGGTGGAAGATGTGACTATTGCCATAAACTCTTCTCCGAACAAATTTTTGGGGTCCAATTACAATGCCTCCATGTTCCCAGCATTTGGAGGTGGGGTCTTGTGTGCCAAGGCATCAATGCTTCTGCAGAATGTTCCACCTGCTTTGCTAGTTCGATTTTTGAGAGAGCATCGATCAGAATGGGCTGATTATGGGGTTGATGCATACTCTGCTGCCTGCCTTAAAGCTAGTCCCTATGCAGTTCCCTGTGCAAGACCTGGTGGCTTCCCCAGCAACCAGGTCATTTTACCTCTTGCTCATACTATTGAGCATGAAGAGTTCCTGGAGGTGGTTCGCATAGAGGGTCATGCATTTTCTCCCGAGGATGTTGCCATGGCACGAGATATGTATCTATTGCAGCTTTGCAGTGGAGTTGATGAAAATGCAATCGGGGCATGTGCTCAACTTGTGTTTGCACCTATTGATGAGTCGTTTGCGGATGATGCTCTGTTACTGCCATCTGGTTTTCGTGTCATTCCATTGGATCCTAAATCAGATGCTCCATCTGCAACTCGGACATTAGATTTGGCATCAACAATGGAAGTAGGATCTGCTAATGCTCGTCCAGCCAGTGAAGCTGATGGCTACAATCTTCGGTCGGTCCTTACTATTGCTTTCCAATTTACCTTTGAAAATCATACACGGGACAATGTTGCTGCAATGGCTCGCCAGTACGTGCGCAGTGTTGTTGGATCCGTTCAGAGAGTTGCCATGGCAATTGCTCCTTCCAGGCTTAATACCCAACTGGGTCCAAAGTCACTTCCTGGTTCACCAGAGGCCCTTACCTTAGCACGATGGATATGTAGAAGCTACAGGATCCACACTGGGACAGAGCTTTTTAGAGTCGAGTCCACAGCAGGAGGTGATGCAATCTTGAAGCAACTTTGGCACCACTCCGATGCAATTATGTGCTGTTCTGTGAAAACAAATGCATCTCCGGTTTTCACCTTTGCTAATCAAGCTGGGTTAGACATGCTCGAAACTACTCTAGTCGCACTTCAAGACATTATGCTTGATAAAGTGCTTGATGAATCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATAATGCATCAGGGTTTTACTTACTTACCAGGTGGGATATGTGTATCAAGTATGAATCGGCCAGTGTCTTATGAGCAGGCCATTGCATGGAAAGTCCTGAATGATGATGATTCTAATCACTGCCTAGCCTTCATGTTTATGAATTGGTCAGTAATAGCCCTCTCCCTCGTCATTCAACAAGATATGTTTGCGTCATGGCAAACATTCCACGTAATGGGCATGTGGGGATGGACCAAAAAAGAAAAGGGGTATGAAGAGTCCTCTAATCTTGTCCAAGGATATGATATGATGACTATGTGCAAGATGGGGTAA 2691 0.4719 MALSMHKDSANSQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMKQQIQTASAGTTTDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDCRCVDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPSTTFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGTDGVEDVTIAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSNQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVAMARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDAPSATRTLDLASTMEVGSANARPASEADGYNLRSVLTIAFQFTFENHTRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLNTQLGPKSLPGSPEALTLARWICRSYRIHTGTELFRVESTAGGDAILKQLWHHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKILCSEFSKIMHQGFTYLPGGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWSVIALSLVIQQDMFASWQTFHVMGMWGWTKKEKGYEESSNLVQGYDMMTMCKMG 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01433 896 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Spst6g01433 896 SMART START_1 166 376 IPR002913 GO:0008289
Spst6g01433 896 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 844 IPR044830 GO:0003700
Spst6g01433 896 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Spst6g01433 896 FunFam homeobox-leucine zipper protein ATHB-15 202 383 - -
Spst6g01433 896 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Spst6g01433 896 MobiDBLite consensus disorder prediction 128 160 - -
Spst6g01433 896 SUPERFAMILY Bet v1-like 414 601 - -
Spst6g01433 896 Pfam MEKHLA domain 699 843 IPR013978 -
Spst6g01433 896 CDD homeodomain 18 78 IPR001356 GO:0003677
Spst6g01433 896 Pfam START domain 167 374 IPR002913 GO:0008289
Spst6g01433 896 Gene3D - 9 84 - -
Spst6g01433 896 Coils Coil 87 107 - -
Spst6g01433 896 CDD bZIP 70 109 - -
Spst6g01433 896 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Spst6g01433 896 SMART HOX_1 15 81 IPR001356 GO:0003677
Spst6g01433 896 SUPERFAMILY Bet v1-like 167 378 - -
Spst6g01433 896 Gene3D - 200 383 IPR023393 -
Spst6g01433 896 ProSiteProfiles START domain profile. 157 358 IPR002913 GO:0008289
Spst6g01433 896 MobiDBLite consensus disorder prediction 128 157 - -
Spst6g01433 896 CDD START_ArGLABRA2_like 161 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01433 Spst-Chr6 13305060 13311484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01433 5 845 Homeobox Transcription Factor Family AT2G34710 79.787 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Spst6g01433 START 1.2e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01433 K09338 - gmx:100779499 1610.12