Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01426 ATGGGGAGTGTCCTTGGGGAGGGACTCTATTTTGTGCTGATTCTGGTAGTAGTGTCTGTGACAGTGAGCCCTGTGGATGCTCAACCAAAGTCTATTCTCTTAAATTGCGGTTCAAGTTCTTCCGTCAATGTGGATGGTAGAAAATGGGTGGGGGACTTGGCCACTGATAACAATGTCACCCTAAGCACCCCCAGTGTTGTTGCTAACACTTCTACATTAAGTGGCAGTTCAATCTATGACCCTCTCTATAAAACAGCCAGAATTTTCACTGTTCCTTTGAATTACACAATAAAAAATGTTCAGGGAAATTACTTCGTTAGGTTCCATTTCTGCCCCTTTGTGATTGACGGCTTCAATGTAAATGAGTCCTTATTTGGTGTTGTGGTCAATGGTGTTAAACTGTTATCAGAGTTTGATGTTCCTCGTAAGATATCCCACAAGAATATTAACTTGCTGAATTCTGGAAGAAATGCTAGTTCATTCTTCTTGGTCAAAGAATATATTCAGGCTGTGAATGGGGATATGCTTGTGATTGAGTTTCTCCCAACCAGAAGCTCCTTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTGTGGGTGAAGTTTTTGCTGGCTCAATTAGTAGCGTTGGTGGAGGAAGTGCTGGAAACTTGAATTTGCCCGGACATGGGATGGAGACTATGTATAGGTTGAATGTTGGTGGTCCTGAGATTCAGTCCAATCAGGATCGTGATCTCTGGAGAACTTGGGAAGTGGATTCTGGATATATGATCATAGAAAATGCTGGGTCTGGAATTAACAACAGTTCTAACATTACCTATTCTTCCATGAATGACACTTCGGTGGCTCCTCTCCTTGTGTACGAAACTGCCAGGACAATGTCCAACTCTGAAGTCTTGGACAAAAGGTTCAACATGTCGTGGAAATTTGTTGTAGATCCTGACTTTGATTACTTGATCCGTTTGCATTTCTGTGAGCTGGTTTATAACAGGGCAAATGAGAGAATATTTAGGATCTACATAAATAATAGGACAGCTGCGGACAATGTTGATGTGTTTGTGCGTGCAGGAGGGATGAATAAAGCATATCACCTGGACTATTTTGATCCTGTGTCATCAAAGATTGACACGGTTTGGGTTCAACTCGGTCCTGACACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTCTGGAGGTCTTCAAGCTTAATCGAAATGGAAATCTTGCCTATGTTGAGAGGTTTGACATAGGTGGTAATTCAGGAAGCAAATCAAAAGCGAGAGCTGTTTGGGTGGGAGTTGGAGTAGGTGTAGCAATTATAGTTGCAATTATAGTTGTTCTAGTATTCTGTTTCTGTAAAAGCAGGAGGAAGGAATCAGGTGATACCAAAAACAACCCTCAGGGTTGGAGACCATTGTTCCTCTATGGAGGGGCTCCTGTTAACAACTCTTCGGGTGGGAAGGGATCAGCAGGAACTCAAAAGCCATACGGATCTGTGGCCTCAATCAGAGTTGGCAAGAGGTTTACATTGGCAGAAATCAGTGCTGCAACAAACAACTTTGATGAGAGTTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGGGAGATTGAAGACGGTGTTCTGGCTGCAATTAAGCGCGCCAACCCCCAGTCTGAGCAAGGCCTGGCTGAATTTGAGACTGAAATTGAGATGCTGTCCAAACTTAGACACAGACATCTGGTGTCCTTAATTGGTTTCTGCGAAGAGAAGAATGAAATGATCTTGGTTTATGAGTACATGGCCAATGGAACTCTCAGAAGCCACCTATTTGGGAGTGGTCTCCCTCCCTTACCCTGGAAGCAGCGCTTAGAAGTGTGCATTGGTGCTGCAAGGGGACTGCACTACCTTCACACAGGTGCCGACCGTGGAATCATTCACAGGGACGTCAAGACAACCAATATTCTGCTAGATGAGAACTTTGTAGCCAAAATGTCTGATTTTGGATTGTCAAAAGATGGTCCAGCTTTTGAACACACCCATGTTAGCACAGCTGTGAAAGGAAGTTTTGGCTATCTTGACCCTGAGTACTTCAGAAGGCAGCAATTGACTGAGAAATCAGATGTATACTCCTTTGGAGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATAAACCCCACCTTGCCAAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCACTTGAAACCATCATTGACCCTCATCTAAGAGGCAACTATTGTCCTGAATCATTGGCCAAGTTTGGAGAGATAGCAGAAAAATGTCTTGCTGATGATGGAAAGAGCCGTCCCACCATGGGGGAAGTGTTGTGGCATTTGGAGTATGTCTTGCAACTACATGAAGCTTGGCTCAACATGGATACCACAGAAACTTCCTTCTCTAGTTGTAGTCATGCTTTGGGAGGTTCAAAAGATGGAGGACTAGAAATGGTACATGAGTCTTCGAGTCAAGATGAAGTTGGTTTTGATAAAAACACACAGCTGAATCTGATTGAGGCCACGCAAGAGAATGAATCAGAGAAGTGA 2586 0.4374 MGSVLGEGLYFVLILVVVSVTVSPVDAQPKSILLNCGSSSSVNVDGRKWVGDLATDNNVTLSTPSVVANTSTLSGSSIYDPLYKTARIFTVPLNYTIKNVQGNYFVRFHFCPFVIDGFNVNESLFGVVVNGVKLLSEFDVPRKISHKNINLLNSGRNASSFFLVKEYIQAVNGDMLVIEFLPTRSSFGFINAIEIVPVVGEVFAGSISSVGGGSAGNLNLPGHGMETMYRLNVGGPEIQSNQDRDLWRTWEVDSGYMIIENAGSGINNSSNITYSSMNDTSVAPLLVYETARTMSNSEVLDKRFNMSWKFVVDPDFDYLIRLHFCELVYNRANERIFRIYINNRTAADNVDVFVRAGGMNKAYHLDYFDPVSSKIDTVWVQLGPDTAAGAAGTDALLNGLEVFKLNRNGNLAYVERFDIGGNSGSKSKARAVWVGVGVGVAIIVAIIVVLVFCFCKSRRKESGDTKNNPQGWRPLFLYGGAPVNNSSGGKGSAGTQKPYGSVASIRVGKRFTLAEISAATNNFDESLVIGVGGFGKVYKGEIEDGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSGLPPLPWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLETIIDPHLRGNYCPESLAKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMDTTETSFSSCSHALGGSKDGGLEMVHESSSQDEVGFDKNTQLNLIEATQENESEK 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01426 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Spst6g01426 861 Gene3D - 31 198 - -
Spst6g01426 861 Gene3D - 224 407 - -
Spst6g01426 861 Pfam Malectin-like domain 34 404 IPR024788 -
Spst6g01426 861 PANTHER OS07G0166700 PROTEIN 509 800 IPR045272 GO:0004714|GO:0006468
Spst6g01426 861 Gene3D Phosphorylase Kinase; domain 1 494 598 - -
Spst6g01426 861 Gene3D Transferase(Phosphotransferase) domain 1 599 816 - -
Spst6g01426 861 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01426 861 SUPERFAMILY Protein kinase-like (PK-like) 501 795 IPR011009 -
Spst6g01426 861 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01426 861 FunFam receptor-like protein kinase FERONIA 489 598 - -
Spst6g01426 861 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Spst6g01426 861 CDD STKc_IRAK 529 794 - -
Spst6g01426 861 FunFam Receptor-like protein kinase FERONIA 599 812 - -
Spst6g01426 861 FunFam Receptor-like protein kinase FERONIA 224 407 - -
Spst6g01426 861 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01426 Spst-Chr6 13233305 13235890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01426 10 815 Receptor kinase-like Gene Family AT1G30570 64.277 0.0 1087
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst6g01426 Malectin_like 2.9e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01426 - - gmx:100791403 1436.4