Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01412 ATGAACTCTTTCAGTGTTTTAACAGTGAAAGTAACACTTTGCTGTGTGGTGGTTATGCTCGGAGCATCACTACCATTTTCAGATGCACAGCTTGATAACTCCTTTTACAAAGATACATGTCCGAAGGTGCATTCTATTGTGCGTGAAGTTGTCAGAAATGTTTCTAAATCTGATCCTCGTATTCTCGCCAGTCTCATAAGGCTCCACTTTCATGACTGTTTTGTTCAAGGGTGCGATGCATCAATTCTTTTGAACAGCACTAGTACTATTGTGAGTGAGCAAACTGCAGCGCCAAATAACAACTCCATAAGAGGTTTAGATGTTGTGAATCAGATCAAGACAGCAGTAGAAAATGCTTGTCCTGGCATAGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTGAGATATCTTCTGTTCTGGCACATGGTCCTGATTGGAAAGTTCCACTGGGAAGAAGAGATAGTTTAAATGCAAGTTTTGATCTTGCTAATCAAAATCTTCCTGGTCCTAATTTCACCCTTGAACAACTCAAATCTACATTTGATAGGCAAGGCCTTAACACAACTGATCTAGTTGCACTTTCAGGTGCTCATACAATTGGTAGAGCTCAATGCAGATTTTTTGATAATCGATTGTACAGCTTCAATAACACTGGAAACCCTGACCCAACTCTTAACACAACCCTTTTACAAGCACTGCAAGCAATATGCCCTAATGGTGGACCTGGAACCAATCTCACCAATTTAGACCTAACCACTCCTGACACATTTGACTCCAACTACTACTCCAATCTTCAACTTCAAAATGGCTTGCTCAGGAGTGATCAAGAGTTGTTTTCCACAAGTGGTGCAGATACTATTGCCATTGTCAACAGTTTCAGTGCTAACCAAACCCTCTTCTATGAAAACTTTAAGGCGTCAATGATAAAAATGAGTATCATACAAGTGTTAACAGGATCACAGGGAGAGATTCGAACACAGTGTAACTTTGTGAATGGAAATTCAGCTAGCTTGGCTACTCTAGCCACCAAACAATCTTCAGAGGATGGTGTACTATGGATGGCTCCAACTTGTTCTGTAATATCTGGTTATGAGAATTCAAGTTGTTTGGTGTCTGTTGTTCTGGAACTGATATATGAAATATGCAAGAACTGTTGGGATAACGGTGCCAATCTTTTGGCATATGCTCAATCCAGTATTGGTCGCTTTCGTGCCGCTAGCAATAACAGGGGTACCGACGCTCTCGAAATCTCCTGGAGTCAATTAGCGTTGAAGTGGCTGATGAAGCGCCCGCTGTTAGAGCCGTGGGAGTTACTGGACAGAATACCAGTGGACCGGCTGTTCAACCCCATCCAGAGGACATCTTTCGGAACACTCGGTTCGTTACTCAGGTCGAGGGACCTTCTGAAGCGCACGAGCCTATCGTCTAGACTTCATCCAACTCTGAGCACGAAGAACGAGATAGAGATGTTCTACCCGTCATTGTTGTCCGCCAACGCTCGTGTCGACGTGCTCCTGGAGCTGCTGGGACAAGACAGACGCGTCATTCCCGTCGCTAGGAGTCGTTGGGAGGCCGGGGGTGCAGAAGCTAATCGGGGATGGAGAGATGTTGAATTGGAAAGTCCATTTCGGAATGCATCGTGGTGCTGGTTGTACAGCTGA 1662 0.4428 MNSFSVLTVKVTLCCVVVMLGASLPFSDAQLDNSFYKDTCPKVHSIVREVVRNVSKSDPRILASLIRLHFHDCFVQGCDASILLNSTSTIVSEQTAAPNNNSIRGLDVVNQIKTAVENACPGIVSCADILALAAEISSVLAHGPDWKVPLGRRDSLNASFDLANQNLPGPNFTLEQLKSTFDRQGLNTTDLVALSGAHTIGRAQCRFFDNRLYSFNNTGNPDPTLNTTLLQALQAICPNGGPGTNLTNLDLTTPDTFDSNYYSNLQLQNGLLRSDQELFSTSGADTIAIVNSFSANQTLFYENFKASMIKMSIIQVLTGSQGEIRTQCNFVNGNSASLATLATKQSSEDGVLWMAPTCSVISGYENSSCLVSVVLELIYEICKNCWDNGANLLAYAQSSIGRFRAASNNRGTDALEISWSQLALKWLMKRPLLEPWELLDRIPVDRLFNPIQRTSFGTLGSLLRSRDLLKRTSLSSRLHPTLSTKNEIEMFYPSLLSANARVDVLLELLGQDRRVIPVARSRWEAGGAEANRGWRDVELESPFRNASWCWLYS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01412 553 FunFam Peroxidase 34 180 - -
Spst6g01412 553 SUPERFAMILY Heme-dependent peroxidases 30 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 Pfam Peroxidase 47 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 CDD secretory_peroxidase 30 331 IPR033905 GO:0004601|GO:0042744
Spst6g01412 553 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Spst6g01412 553 PANTHER PEROXIDASE 72-RELATED 28 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 Gene3D - 35 332 - -
Spst6g01412 553 Gene3D Peroxidase, domain 2 168 311 - -
Spst6g01412 553 FunFam Peroxidase 168 311 - -
Spst6g01412 553 ProSiteProfiles Plant heme peroxidase family profile. 30 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01412 553 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01412 Spst-Chr6 13091872 13096030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01412 16 337 Peroxidase AT5G06730 59.006 5.82e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01412 K00430 - vum:124829290 595.119