Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01409 ATGAATTCCCTTGGTCTCACCACATTATGCTGTGTTCTGGTTGTGGTTGGAACACTAGAGTGCTTCTCATATGCACAACTAGATCCATCGTTTTACGACAGCACATGTTCAAATATGCATTCAATTGTACGGGATGTGCTCTCAAATGTTTCCCAATCTGATCCCCGAATGCTTGCGAGTCTCATCAGACTCCACTTTCATGACTGTTTTGTTCAAGGGTGTGATGCATCAATTCTTTTGAACGACACTGATACGATCGTGAGTGAGCAAAGTGCAGCGCCAAATGACAACTCAATAAGAGGTTTGGATGTTGTGAATCAGATCAAGACAGAGGTGGAAAATGCTTGTCCTGGCATAGTTTCATGTGCTGATATTCTTGCTCTCGCAGCTGAAATATCTTCTGAGCTGGCTAATGGTCCTGTTTGGGAAGTTCTATTGGGAAGAAGGGATAGTTTGACAGCAAATCAAACCCTTGCTAATCAAAACCTTCCGGGTCCTAATTTTACACTTGATCAACTTATTTCCACATTTGATAATCAGAATCTCAACATTACTGATCTAGTTGCACTTTCAGGTGCTCATACAATTGGTAGGGCTCAATGCAGATTTTTTGATAATCGATTGTATAATTTTAGCAACAGTGGGAACCCAGATCCTACTCTAAACACAACTCTCTTAGAATCACTGCAAGCAATATGTCCCAATGGTGGACCTGGAACAAATCTCACCAATTTGGACTTAACTACTCCTGACACATTCGACTCCAACTACTATTCCAATCTTCAACTGCAAAATGGCTTGCTTCGGACAGACCAAGAGTTGTTCAGCACAACTGATGCAGATACTATTCCTATTGTCAATAGCTACATCAGTAACCAAACTCTTTTCTTTGAAAATTTCAAGGCATCAATGATAAAAATGGGCAACATTGGAGTGTTAACAGGATCACAGGGTGAAATTCGAACACAATGTAATTTGGTGAATGGAAATTCTGCTACACTTGCTACATTTACCAGCAAAGAATCATCACAAGATGGAATGGTTGGCTCAATTTAA 1056 0.4025 MNSLGLTTLCCVLVVVGTLECFSYAQLDPSFYDSTCSNMHSIVRDVLSNVSQSDPRMLASLIRLHFHDCFVQGCDASILLNDTDTIVSEQSAAPNDNSIRGLDVVNQIKTEVENACPGIVSCADILALAAEISSELANGPVWEVLLGRRDSLTANQTLANQNLPGPNFTLDQLISTFDNQNLNITDLVALSGAHTIGRAQCRFFDNRLYNFSNSGNPDPTLNTTLLESLQAICPNGGPGTNLTNLDLTTPDTFDSNYYSNLQLQNGLLRTDQELFSTTDADTIPIVNSYISNQTLFFENFKASMIKMGNIGVLTGSQGEIRTQCNLVNGNSATLATFTSKESSQDGMVGSI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01409 351 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PANTHER PEROXIDASE 72-RELATED 24 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Spst6g01409 351 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Spst6g01409 351 Pfam Peroxidase 43 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 FunFam Peroxidase 164 307 - -
Spst6g01409 351 FunFam Peroxidase 30 173 - -
Spst6g01409 351 Gene3D - 31 328 - -
Spst6g01409 351 Gene3D Peroxidase, domain 2 164 307 - -
Spst6g01409 351 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01409 351 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01409 Spst-Chr6 13066083 13069278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01409 12 332 Peroxidase AT5G06730 60.748 5.35e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01409 K00430 - gmx:100814455 558.14