Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01407 ATGAGGTGTTTCCATGTCACAGTGACAGCTCTGTGCTGTGCACTGGTTGTGCTGGGAGTGTTTCCGCTCTCTCTTCATGCACAACTTGATCCTTCCTTTTACAGGGACACATGTCCCAAGGTTCACTCCATTGTTCGTGAAGTGGTGAGGAACGTTTCAAAGAAAGATCCTCGCATGCTCGCCAGTCTCATTAGACTTCATTTTCATGACTGCTTTGTTCAAGGGTGTGATGCATCAATTTTGTTGAACAACACTGCGACGATAGTGAGTGAGCAAGAAGCTTTGCCAAACAACAACTCAATAAGAGGTTTGGATGTTGTGAACGATATCAAGACAGCAGTGGAAAATGCTTGCCCTGGAGTGGTTTCTTGTGCTGATATTCTTACCCTTGCAGCTGAAATATCTTCTGTTCTGGGTGGTGGTCCTGACTGGAAAGTTCCATTGGGAAGAAGGGATAGTTTAACGGCAAACAGAACACTTGCCAATGAAAACCTTCCAGCTCCATTCTTCAACCTCACTCGGCTTAAAGCTGCATTTTCTAAACAAGGTCTTGACACTACTGATCTAGTTGCGCTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCTCTTTCATTACTGACCGATTGTACAACTTCAGTGGTACTGGCAAACCCGATCCAACTCTCGACACAACTTATTTACAACAATTGCGCACGCAATGCCCCCAAGGAGGACCGAACAACCTTGTCAATTTTGACCTAACTACTCCTGATGTATTTGACAAGGCCTACTACTCCAATCTTCAGGCAAAGAAGGGCTTGCTTCAGAGTGATCAAGAGTTGTTCTCAACACCTGGTGCTGATACCATTGGCATTGTCACCAGGTTTAACGGTGATCAAAAGGTTTTCTTTGACGCATTTGAGGCTTCAATGATTAAAATGGGTAATATTGATGTGCTCACTGGGAAGAAAGGAGAAATCAGAAAACATTGTAATTTTGTTAACAAGAAATCTGTTGAACTTGATATTGCTAGTGTCGCCTCTGAAGAATCTTCAGTGGAGGGCATGGTTAGCTCATTCTAA 1065 0.4385 MRCFHVTVTALCCALVVLGVFPLSLHAQLDPSFYRDTCPKVHSIVREVVRNVSKKDPRMLASLIRLHFHDCFVQGCDASILLNNTATIVSEQEALPNNNSIRGLDVVNDIKTAVENACPGVVSCADILTLAAEISSVLGGGPDWKVPLGRRDSLTANRTLANENLPAPFFNLTRLKAAFSKQGLDTTDLVALSGAHTFGRAHCSFITDRLYNFSGTGKPDPTLDTTYLQQLRTQCPQGGPNNLVNFDLTTPDVFDKAYYSNLQAKKGLLQSDQELFSTPGADTIGIVTRFNGDQKVFFDAFEASMIKMGNIDVLTGKKGEIRKHCNFVNKKSVELDIASVASEESSVEGMVSSF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01407 354 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PANTHER PEROXIDASE 72-RELATED 25 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 FunFam Peroxidase 32 176 - -
Spst6g01407 354 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Spst6g01407 354 FunFam Peroxidase 166 308 - -
Spst6g01407 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Spst6g01407 354 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 Gene3D - 33 329 - -
Spst6g01407 354 Gene3D Peroxidase, domain 2 166 308 - -
Spst6g01407 354 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01407 354 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01407 Spst-Chr6 13038069 13040329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01407 26 342 Peroxidase AT2G38380 58.879 8.39e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01407 K00430 - gmx:547499 612.453