Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01406 ATGGGTTCCATGAGTGCAGTAGTAGTGGCAGTGTTGTGTGCATTTGCTATGCATGCAGGGTTGTTAGTCACTACTGCTCAGCTAGATCCCACGTTCTACGATGACACATGTCCAGACCTATATGATACTGTGTTTGATGTTATTTCAAATGCTTCCCTCACCGATCCCCGAATCGGTGCCAGTCTACTCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCAGTTTTGCTGAACAGCACTGATACCATAGACAGCGAGCAAGGTGCAATTGGAAATATCAACTCAATAAGGGGCTTGGACGTAGTCAATGACATCAAGACAGCGGTGGAAGATAGCTGTCCAGGGACAGTTTCTTGTGCCGATATTCTTGCTATTGCAGCTGAAGTAGGTTCTGTTCTGGGAGGTGGTCCATCATGGGATGTTCTATTAGGAAGAAGGGATAGCTTAAATGCAAACCTTACCCTTGCAAATCAAAGTCTTCCATCACCCTTCTTCACACTGGATCTGCTCAAAGCTTCCTTTGCAGCTCAAGGTCTCAACACAACTGATTTAGTTACTCTCTCAGGTGCTCATACGTTTGGAAGAGCTCGATGCAGTGTATTCAATAACCGATTAAGCAACTTCAACAACACTGGCAATCCTGACCCAACTCTGAATACAACTTACTTGGCAATATTGAGTGGGATATGTCCTCAAAATGCAACTGTTGTTAACATCACCAATTTGGACCTCACCACACCTGATCAATTCGATAACAACTACTACTCCAATCTTCAGCAACTCAATGGCTTGCTTCAGAGCGACCAGGAATTGTTCTCCACTCCTGGTGCTGATACGGTTGACCTTGTCAATAGTTTCAGCAGCGACCAAAGTGTTTTCTTTGACAATTTTATAGCGTCAATTATAAAAATGGGAAATATTGGAGTGCTTACAGGGACTGACGGAGAAATTCGCACGCAATGTAATTTTGTCAACTCAGAAAATTCTGGATTATTATTAGCTGGTGTGGCCTCCAATGATTCTAAAGAAAAACTTGTTGCTCAATCTAAGTAA 1065 0.4282 MGSMSAVVVAVLCAFAMHAGLLVTTAQLDPTFYDDTCPDLYDTVFDVISNASLTDPRIGASLLRLHFHDCFVQGCDASVLLNSTDTIDSEQGAIGNINSIRGLDVVNDIKTAVEDSCPGTVSCADILAIAAEVGSVLGGGPSWDVLLGRRDSLNANLTLANQSLPSPFFTLDLLKASFAAQGLNTTDLVTLSGAHTFGRARCSVFNNRLSNFNNTGNPDPTLNTTYLAILSGICPQNATVVNITNLDLTTPDQFDNNYYSNLQQLNGLLQSDQELFSTPGADTVDLVNSFSSDQSVFFDNFIASIIKMGNIGVLTGTDGEIRTQCNFVNSENSGLLLAGVASNDSKEKLVAQSK 354
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01406 354 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 Gene3D Peroxidase, domain 2 165 308 - -
Spst6g01406 354 Gene3D - 32 329 - -
Spst6g01406 354 FunFam Peroxidase 165 308 - -
Spst6g01406 354 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Spst6g01406 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Spst6g01406 354 PANTHER PEROXIDASE 72-RELATED 23 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 FunFam Peroxidase 31 171 - -
Spst6g01406 354 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Spst6g01406 354 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 Pfam Peroxidase 47 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g01406 354 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst6g01406 Spst-Chr6 13008994 13011877 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01406 24 333 Peroxidase AT5G06730 60.968 1.31e-135 389
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01406 K00430 - vra:106774868 534.643