Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01361 ATGCGTCGCTGCAATGATTTAGACAGTGAGAGAGTGAGGTTATGGAAGAAGCATTCAAAACCTGATCAACTTGAAGGGCCCATCCCCATATCCAATGGAACTACTCCTGGTCTTGATATGATGCACAATACAAAGCACTTGTATGGAGGGCAGGGTCAGGATTATGAAAATGATGTATTTATAAAAGATGTTTTTGACAGTCTTTTTGAATCCAACCGATTTGGTGGCAACATTCCATCTACACTTGGCCTTGTCCAGACTCTGGAGGTGGTTCGTGTCCAACAATCACCTGTCTGGGTTCCCCCCAAACCTTACTGGAATGAATTCCCTCAGTTACCTAATGATGGAGAATACAAAACTTCAAGGAGCAATTCCTGTCTCCTTCTTCAACCTGCAACAGTTGCAGACAGTGTTAGTACTGGAGCTCCACAGAGTTATTGTTCCATTAAAGAATCCAATGACTCATATTCAACGGCACCACAAAACTGTGTACCTGTTCCCTGCAGCTTAGATCAGACATTAAGCCCCAAATGCAAATGTGCATACCCATATACAGGAACTTTCTATCTCAGAGCTCCTTCCTTCTCAGACTTGGAAAACAAGACTGTCTTTGTAACCCTGGAGTTATCTCTGATGCAGTCTTTACAACTTCATGAGACACCTGTTGATTCAGTTTCTTTAAGCAATCCAAGGAAGGACATATATCAGTACGTTGAATTGACTTTAAAACTATTTCCATCTGGCCAAGATCGTTTCAATCGAACTGGGATTTCTGCTACAGCCTCTATTCTCAGCAGCCAAACATACAAGCCTCCTTCATCGTATGGACCATATTATTTTATTGCTGATGACTACGTAAACTTCATGAGTGACACAGAAGTTCCTGTGACAACATCCAGTAAATCTTCAAATACTGCCATCATAGCTGGAGCTGCGGCTGGTGGTGCTGCCCTGTTGATTTTGGTAATTGTTCTATTTGTGTATGCTCTCCACCGGAATAAGAAGTCAATAGGAGCAACTGGGAAAAACAAACCTTTTGAACAATGGGATCCGGATGAGAGCAACAGTAGCATCCCACAGTTGAAAGGAGCAAGGCGCTTCAGTTTTGAAGAGATACAGAACTACACCAAAAACTTCTCACAAGTCAATAATATAGGATCTGGCGGCTACGGGAAGGTTTATCGGGGAACTCTTCCCAACGGGAATCTGATTGCAGTGAAGCGAGCTCAGAAGGAATCTATGCAGGGAGGATTGGAGTTTAAAACTGAGATTGAACTTCTATCAAGAGTCCACCATAAAAATCTTGTTAGCCTAATTGGTTTCTGCTTTGAGCAAGGAGAACAAATGCTGATTTACGAATTCGTTGCAAATGGTACTTTGAAGGACACTCTTTCAGGGAAGTCTGGAATTAGATTAGATTGGATTAGAAGGCTGAAAATAGCTCTTGGTGCTGCCAGAGGTCTGGATTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGGGACATCAAATCCACTAACATCTTACTGGATGATCGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTAGGCGATGGTGCAAAAGGTTATATCACCACACAAGTCAAAGGAACACTGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGAGTGCTGTTGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAGTACATTGTGAAAGTGGTCAAGGGTGCTCTAGACAAGACAAATGGCTTCTATGGTCTTGAGGAAATTCTTGATCCAACTATTGAAAAGGGGACAGCACTGAGCGGTTTTGAGAAGTTTGTGGATCTTGCAATGCAGTGTGTTGAAGAGTCAAGTTCTGACAGGCCTACAATGAATCATGTGGTGAAAGAAATCGAGAACATGTTGCAGTTGGCCGGTTCAAGCCCCATCTTATCAGCATCAGCATCCACTTCATCTAGTTATAATAATCCAACTAAGGGTAGTTCCCTCCATCCTTACGACAATGAATACTTTGATTCAACAGTAGCACAAGATATCACCAAAGATTTTGAAGTTCTGAAGTCTCTAAGTGATTCTTGGCAAGGCCAAATTCCTAAATGGGTGGGTTCAGATCCTTGCGAAGGTTGGTATGGCATAAACTGCAGACAGTCTCGTGTTATTTCCATATCATTAACAGATATGGGTTTGACTGGCCAGCTTTCTGGAGATATTGGATCACTTTCTGAATTGGATAATCTGGATCTCTCATACAATAGGGGTCTAACAGGACAACTTCCACGAGAAATTGGAAACTTAAAGAAGCTAACAAAATTAACTCTTGTTGGTTGTGGTTTTACTGGTCGTATTCCAGATGAAATAGGATCTCTACAGCACCTTGAATTCTTATCTTTAAACTCCAACAATTTTGCTGGACCAATTCCACGTTCTATTGGCAATCTGTCAAATCTTACTTGGCTAGATTTAGCTGACAATCAGCTAGATGGATCCGTCCCAGTATCTAGTGGCAGTACCCCTGGTCTTGATATGTTACACAATGCATTGCACTTTCATCTTGGGAAGAATAGGCTTTCAGGAGAAATTCCTCCGAAACTTTTTAGCTCAAAAATGACTCTGATACATGTGATATTTGATAGCAATCAACTAGTTGGCAGGATTCCGGAAACGCTTGGGCTAGTTACGAGTTTGACATTGGTCAGGCGCTTTGAAAATAATTCACTGGATGGATTTGTGCCTCAGAGCCTCAACAACCTTATCAATGTCACAGACCTGTTGTTGTCCAACAATAAGCTGCAAGGTGCCCTGCCAAACCTTACTGGGATGAACTCCCTAAAATACTTACAAATGGAAAATGTGTACCTTGTTGGAACAATTCCGGATCTTTTATTTAGCCTCCCCAATTTACAGAATGTCACTGCAGTAATTATTGGAGTAACAATTGCTGGCTCTTCTGTTATGCTTGTGTTATTAGTCCTGGCAGGTGTTTATGCTTACCGCCAGAAGAGTAAGGCAGAAAGAGCAATATCTCGAAGCAATCCTTTCGCACAGTCGTTTACTCATTCATGCAAACTTGCGTGGCACAGCGACAGAAAGTCATCATCTGTTTACCGGGGAACTCTTCCCTGTGGGAAAGTGGTAGCCATAAAACGTGCTCAAAAAGAATCAAAGCAGGGAGGGCAAGAATTCAAAGCTGAAATTGAACTCCTTTCAAGGGTCCACCATAAGAATCTGGTTAGCCTTGTGGGATTCTGCTTTGAACGAGGAGAACAAATGTTGGTTTACGAGTTTGTTCCTAATGGAACTTTGAAGGATGCTCTCACAGGGAAATATGGTATTGCTTTGGGCTGGAGTAGAAGGCTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCATGAACATGCCGATCCGCCTATTATACACAGGGACATCAAGTCAAACAACATTTTGTTGGATGAGAACTACAATGTTAAAGTTGCTGATTTTGGTCTCTCCAAGTGTATCTTAGATGATGACAAAGATCATATCACCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGAATATTATACTAGTCAGCAGTTGACTGAAAAGAGTGATGTCTATAGTTTTGGAGTGCTAATGCTGGAGCTAATTACTGCAAAAAAGCCAATAGAACGGGGGAAATATATTGTGAAAGTGGTCAAGAATACAATAGATAAGACAAAAGACTTGTATGGTCTTCACGAAACCATTGATCCAGCCATCTGTTCAGGATCAACACTGGAGGGTTTTGAGAAGTTTGTGGACCTTACAATGGAGTGTCTTAAAGAGTCAGGAGTCGACAGGCCCACAATGAGTGAAGTGGTCATAGAAATTGAAGACATGTTGCGATCTGATGGTTTGAACCTTAGATCTGAATCAGTTGCATCCACTTCATCCAGTTTTAGATATCAGGAGGTAAGTATAGTGAGTTCCCAACAAGACCACCCTCACAGCAATGAGTCTTTTGGTTGA 4056 0.4194 MRRCNDLDSERVRLWKKHSKPDQLEGPIPISNGTTPGLDMMHNTKHLYGGQGQDYENDVFIKDVFDSLFESNRFGGNIPSTLGLVQTLEVVRVQQSPVWVPPKPYWNEFPQLPNDGEYKTSRSNSCLLLQPATVADSVSTGAPQSYCSIKESNDSYSTAPQNCVPVPCSLDQTLSPKCKCAYPYTGTFYLRAPSFSDLENKTVFVTLELSLMQSLQLHETPVDSVSLSNPRKDIYQYVELTLKLFPSGQDRFNRTGISATASILSSQTYKPPSSYGPYYFIADDYVNFMSDTEVPVTTSSKSSNTAIIAGAAAGGAALLILVIVLFVYALHRNKKSIGATGKNKPFEQWDPDESNSSIPQLKGARRFSFEEIQNYTKNFSQVNNIGSGGYGKVYRGTLPNGNLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQMLIYEFVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDDRLNAKVSDFGLSKPLGDGAKGYITTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVLLLELITARRPIERGKYIVKVVKGALDKTNGFYGLEEILDPTIEKGTALSGFEKFVDLAMQCVEESSSDRPTMNHVVKEIENMLQLAGSSPILSASASTSSSYNNPTKGSSLHPYDNEYFDSTVAQDITKDFEVLKSLSDSWQGQIPKWVGSDPCEGWYGINCRQSRVISISLTDMGLTGQLSGDIGSLSELDNLDLSYNRGLTGQLPREIGNLKKLTKLTLVGCGFTGRIPDEIGSLQHLEFLSLNSNNFAGPIPRSIGNLSNLTWLDLADNQLDGSVPVSSGSTPGLDMLHNALHFHLGKNRLSGEIPPKLFSSKMTLIHVIFDSNQLVGRIPETLGLVTSLTLVRRFENNSLDGFVPQSLNNLINVTDLLLSNNKLQGALPNLTGMNSLKYLQMENVYLVGTIPDLLFSLPNLQNVTAVIIGVTIAGSSVMLVLLVLAGVYAYRQKSKAERAISRSNPFAQSFTHSCKLAWHSDRKSSSVYRGTLPCGKVVAIKRAQKESKQGGQEFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEFVPNGTLKDALTGKYGIALGWSRRLKVALGAARGLAYLHEHADPPIIHRDIKSNNILLDENYNVKVADFGLSKCILDDDKDHITTQVKGTMGYLDPEYYTSQQLTEKSDVYSFGVLMLELITAKKPIERGKYIVKVVKNTIDKTKDLYGLHETIDPAICSGSTLEGFEKFVDLTMECLKESGVDRPTMSEVVIEIEDMLRSDGLNLRSESVASTSSSFRYQEVSIVSSQQDHPHSNESFG 1351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01361 1351 ProSiteProfiles Protein kinase domain profile. 1001 1310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01361 1351 SUPERFAMILY Protein kinase-like (PK-like) 1049 1324 IPR011009 -
Spst6g01361 1351 Pfam Protein kinase domain 380 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01361 1351 SUPERFAMILY Protein kinase-like (PK-like) 365 675 IPR011009 -
Spst6g01361 1351 SUPERFAMILY L domain-like 702 987 - -
Spst6g01361 1351 FunFam Leucine-rich repeat protein kinase family protein 343 454 - -
Spst6g01361 1351 CDD STKc_IRAK 385 651 - -
Spst6g01361 1351 Gene3D Ribonuclease Inhibitor 694 857 IPR032675 -
Spst6g01361 1351 MobiDBLite consensus disorder prediction 18 37 - -
Spst6g01361 1351 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 455 664 - -
Spst6g01361 1351 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 1113 1322 - -
Spst6g01361 1351 FunFam Leucine-rich repeat protein kinase family protein 853 953 - -
Spst6g01361 1351 Gene3D Phosphorylase Kinase; domain 1 350 454 - -
Spst6g01361 1351 Gene3D Phosphorylase Kinase; domain 1 1046 1113 - -
Spst6g01361 1351 CDD STKc_IRAK 1049 1309 - -
Spst6g01361 1351 Gene3D Ribonuclease Inhibitor 858 989 IPR032675 -
Spst6g01361 1351 PANTHER RECEPTOR-LIKE PROTEIN 55 69 651 - -
Spst6g01361 1351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1157 1169 IPR008271 GO:0004672|GO:0006468
Spst6g01361 1351 FunFam Leucine-rich repeat family protein 698 852 - -
Spst6g01361 1351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Spst6g01361 1351 SMART serkin_6 1042 1310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01361 1351 SMART serkin_6 379 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01361 1351 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Spst6g01361 1351 Gene3D Transferase(Phosphotransferase) domain 1 1114 1327 - -
Spst6g01361 1351 Gene3D Transferase(Phosphotransferase) domain 1 455 660 - -
Spst6g01361 1351 Pfam Protein tyrosine and serine/threonine kinase 1052 1303 IPR001245 GO:0004672|GO:0006468
Spst6g01361 1351 ProSiteProfiles Protein kinase domain profile. 379 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01361 Spst-Chr6 12526639 12543288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01361 699 987 Receptor kinase-like Gene Family AT5G49760 53.767 4.34e-77 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Spst6g01361 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01361 - - gmx:100780344 910.212