Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01349 ATGGCCTCGGAGATTGAAATTTCTCCGGCCGATGCTCGCAAGGCTCCCGGCAAGGATCAGCAAGCTGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTCGTCCTGTCCTTTGTCCTCGGCCATGTTCTCCGCCGCAAGAAGATTTACATCGTCCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGCATTCTAGCTAACATTTCAGACACCGAGACTAGTATCAGGGCGTGCTATCTTGGTGGTTTGCTGTTTCTAATGTATAGGCTACCTTTGGTTGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACTGATCCTGTTACTGTTTTGTCCATATTTCAGTGGTTACTTGGACTGTTATTTGAGGCCCATAGCGGTCTAGGGCCAGTCATCTATCGCACTATAGAGTTGCTTTTGAGCACTAAGCTTTGTGATTTCCTAGAGCTGGGCACTGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATCTGTTAAAGCTCACCCATCTGGACAAAATTTATTTATGGTGGTTGTTCGATTTTTAGAGACTTTCGTAGGGTCAATGTCAGCAGGTGTTGGAAACCTATTTAAGTATGCAGGATTGAATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCAATACTGTTCACTGGAATAGTCATGAAACATTATTCATATTCCAATTTATCACAAAGTTCACAAAGATTTGCCTCTGCCTTTTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATATATTTATTGGAATTGCAAGGGCTGCAAATGTCTTCTCTTGTGCTTATTTGGTGAATCTGGTCAGACCTAGTCATCGAAAAATACCTCTAAAACATCAGAAGGCTCTTTGGTATAGTGGACTTCGAGGAGCAATGGCTTTTGCACTAGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCAATAGTTGTTTTGACGGTATTGCTAATTGGTGGTTCAACAGGTAACATGCTGGAAGCTCTAGATGTTGTAGGTGGAGATAATGATAGCCCTTTGGCTTCAGTTGGTACTATTACTAATTTTGATGGAAACAATGGATATATTGCTCCTCCTTACAACGAAGAGTCATCTTCAGGGAACAAAATCAAAATGAAGCTAAAAGAATTCCACAAGAGGTAG 1362 0.417 MASEIEISPADARKAPGKDQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIVPEASASLLIGLIVGILANISDTETSIRACYLGGLLFLMYRLPLVECLMFGALISATDPVTVLSIFQWLLGLLFEAHSGLGPVIYRTIELLLSTKLCDFLELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKAHPSGQNLFMVVVRFLETFVGSMSAGVGNLFKYAGLNIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHIFIGIARAANVFSCAYLVNLVRPSHRKIPLKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGNMLEALDVVGGDNDSPLASVGTITNFDGNNGYIAPPYNEESSSGNKIKMKLKEFHKR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01349 453 Pfam Sodium/hydrogen exchanger family 82 400 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst6g01349 453 PANTHER SODIUM/HYDROGEN EXCHANGER 80 451 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Spst6g01349 453 Gene3D - 95 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01349 Spst-Chr6 12394371 12400828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01349 20 402 Antiporters AT3G05030 29.545 1.31e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01349 K14724 - gmx:100790830 667.537