Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01315 ATGGAGCCGGAGACTACTCCTTGCACTAGATCAGGTAGGGCCCAGATAATGAATTTGAAAAGTGGAGGTGTTATAATTCAAAAGAAGCTAGAGGAAAACGTGGAATCCTTTTTAAGTCCAACTTTTATTTACCTTCCTGTTGAGACCAAAATGCCAACCATGCAAGAGGGTTGTATTTTCCATTCTGTAGTTGGGAAAGCTTTGGGGTTCATGCGGAAATTGAGGAAGATTCAAACAAGCCATGATGGATATTACATTCAAGACTGCAAGCTTCAACAAAGAGGTGAAGTTAACGTGGATAAAGTTAAACTCTTCAGCTTAAAGGAATTGGAGAAGGCCACCGACAACTTCAATACGAATCGAGTACTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATAGATGGAACAATCATTGCAGTGAAAAAATTTAAGGTCCAGGGAAAGATTGAAGAATTCATCAATGAATTTGTCATCCTCTCACAAATTAATCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTAAGATTCCTTTGCTTGTGTATGAATTCATTCCTAATGGTAACCTTTTCGAGTACTTGCATGAACAAAATGAGGATTTGCCAATGACATGGGACATGCGTTTGAGAATTGCCACTGAAGTTGCAGGAGCTTTATTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGACATAAAGTCAACAAATATACTATTGGATGAAAAGTATAGGGCAAAAGTAGCAGACTTTGGCACATCCAGAATGATTTCCATTGATGTTACTCATCTCACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATTTTTTCAAACTAAGGAAGCAAAATGTTTAGCTTCACATTTCGTTATCTGTAAGGAGGAAAATCGTGTGCTTGATATTATTGATGAAAGAGTGATGAAGGAAGGGCAGAAAGATCATATCATGGAAGTTGTCAATCTTGCAAGTAGATGTTTAGAGTTGAATGGAAAGAAACGGCCAACTATGAAGGAAGCCACATTGGAATTAGAAGGTATCCGAAGATTGGAAGGAAAGTCTAATGCAGAAGAAAGACATAATAAACTTGACGTATATCATGATTGCATAAATGAGGTGATATGCTTGTTTGTGGCTGTTGCGTTCATGGGTGAGATGCTGAAGCTGTTCACTTCATCGAGTGAACGCTTACTGATTCGACCTTCTAGCTGTAAGGAGGATTCTTCCTTCCTTGTTGGAGTTCACAATTTTAGTTATGGTCTGTGA 1296 0.3858 MEPETTPCTRSGRAQIMNLKSGGVIIQKKLEENVESFLSPTFIYLPVETKMPTMQEGCIFHSVVGKALGFMRKLRKIQTSHDGYYIQDCKLQQRGEVNVDKVKLFSLKELEKATDNFNTNRVLGKGGQATVYKGMLIDGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHEQNEDLPMTWDMRLRIATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEFFQTKEAKCLASHFVICKEENRVLDIIDERVMKEGQKDHIMEVVNLASRCLELNGKKRPTMKEATLELEGIRRLEGKSNAEERHNKLDVYHDCINEVICLFVAVAFMGEMLKLFTSSSERLLIRPSSCKEDSSFLVGVHNFSYGL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01315 431 Gene3D Transferase(Phosphotransferase) domain 1 295 383 - -
Spst6g01315 431 Gene3D Transferase(Phosphotransferase) domain 1 191 294 - -
Spst6g01315 431 Gene3D Phosphorylase Kinase; domain 1 86 190 - -
Spst6g01315 431 Pfam Protein kinase domain 118 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01315 431 FunFam Somatic embryogenesis receptor kinase 1 86 190 - -
Spst6g01315 431 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 292 364 IPR045274 GO:0007166
Spst6g01315 431 ProSiteProfiles Protein kinase domain profile. 117 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01315 431 SUPERFAMILY Protein kinase-like (PK-like) 100 354 IPR011009 -
Spst6g01315 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Spst6g01315 431 SMART serkin_6 117 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01315 Spst-Chr6 12161423 12166055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01315 90 358 Receptor kinase-like Gene Family AT1G79670 57.947 5.75e-115 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Spst6g01315 Pkinase 9.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01315 - - vum:124846131 482.256