Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01314 ATGATTCTGAAATTCTTAATCCCTGTCATCCTTTTGGTAACATGCCCCGTACATTTACACGTATCTGCACAACTTTACCCACCAATAGCAAAGCCTGGCTGTGATTCGCGATGTGGAGATGTGGGCATTCCTTTTCCGTTTGGAATGAAGGGTTCCGATTGCTATGCAGGAGAGTGGTTTGAAATAGAATGCAGAAGCACTTCCAGCAACCATTACTATTCCGCACCTTACCTCAAGTCAACAGGAGTGGAAGTGACATCCATTGATGTCCAGAGAGGCACGGTTACAATCAAACATCCGATTTACCGCAGTAACTGCGGAACCAAAGATTCTCCGCCGGTCAACCAGTCGCTGGAAGGAAGTCCTTTCGTGTATTCAGAGGAATACAACAAATTTGTTGCCGCAGGTTGCAATATTATTTCCTTTTTGCAGTTAAATGGGTCAGAAGCTAGTGGTTGTGTGTCCATCTGCGACAACGAGAAGAAGGTGGATGATATCGGGAAAATGAAGCTCTCAAGCACTGATTGTAATGGCAAGTACTGCTGTGAGACTTCCCTGCCACTGTATCTTAACGAGTATACCACAGAAATAAAAGGTTTAAAGGAGAATGGAACGGGTCATCATGAGTGCAGTTACGCCATGGTTGTAAAACAAGATAGGAACAGCTACCAAGACTATACTGGTGATCCCCTGAAAAGCTACTACTCTCTTACTCATGGTGCGGTGAAGGATCTAGATATGGTCCCAGCGGTGCTTGAATGGGAGATTCTGAACAATTTGGACCTTAAACTCCCTGCAGGTCATCACTCTCACTGTTATGACACGAATGTTACATCTTCGCGATATAAACGCTCAGGCCGGAGATGCTCCTGCGAAGTAGATGCTTACGGTTCCAATCCCTACGTTGCTGGAGGTTGTAGTCAACCTGCAAATTATCCGGAGGCCGAAGGGACAAGTGGAGTAACAATGTCTATCCTTAAAGGAGTTTCTATAAGCTTTGGAGCCATCATTTTACAGCTTCTTTCATTGCGGGTGTTTGATGTTGCAAAAAGAACCACGCTGAATAAATACAGAGAAAAAATCTTCAAACGAAATGGAGGATTATTGTTAGAACAAAAATTGTCTTCTGGTGAAGTTAATATGAATAAAGTTAAACTGTTTAGCTTAAAGGAATTGGAGAAAGCCACCAACAACTTTAATATGAATAGAGTGCTTGGAAAAGGTGGTCAAGCTACTGTTTACAAAGGCATGTTAATAGATGGAACAATTATTGCAGTGAAAAAATTTAAGGTCCACGGAAAGATTGAAGAATTCATCAATGAATTTGTCATTCTTTCACAAATTAACCACAAAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTGAAATTCCTTTGCTTATTTATGAATTTATTCCTAATGGTAACCTTTTCGAGTACTTGCATGAACAAAATGAGGATTTGCCAATGACATGGGACATGCGTTTGAGAATTGCCACTGAAGTTGCAGGAGCTTTATTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGACATAAAGTCAACAAATATACTATTGGATGAAAAGTATAGGGCAAAAGTAGCAGACTTTGGCACATCCAGAATGATTTCCATTGATGTTACTCATCTCACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATTTTTTCAAACTAGTCAATTCACAGAAAAGAGTGATGTCTACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGCAAAAGCCAATATCCCTACTAAGTCCAGAGGAAGCAAAAAGTTTAGCCTCACATTTCATTATTTGTATGGAGGAAAATCGTGTGTTTGATATTATTGATGGAAGAGTCATGAAGGAAGGGGAGAAAGATCATATCATGGATGTTGCCAATCTTGCAAGTAGATGTTTAGTGTTGAATGGAAAGAGACGACCAACTATGAAGGAAGTCACATTGGAATTAGAAGGTATCCGAAGATTGGAAGGAAAGTCTAATGCACAAGAAAGACATAATGAACTTGTTCGAAGTGAAGACTATCAATCATGGAATGAGTATTCTGATACCTCAGAAATAAGGTCAAGTTTTGATCTAAACAGTAGAACACTCAGTTTGGACGATGATATTCATATTCTTACCACATAA 2181 0.3998 MILKFLIPVILLVTCPVHLHVSAQLYPPIAKPGCDSRCGDVGIPFPFGMKGSDCYAGEWFEIECRSTSSNHYYSAPYLKSTGVEVTSIDVQRGTVTIKHPIYRSNCGTKDSPPVNQSLEGSPFVYSEEYNKFVAAGCNIISFLQLNGSEASGCVSICDNEKKVDDIGKMKLSSTDCNGKYCCETSLPLYLNEYTTEIKGLKENGTGHHECSYAMVVKQDRNSYQDYTGDPLKSYYSLTHGAVKDLDMVPAVLEWEILNNLDLKLPAGHHSHCYDTNVTSSRYKRSGRRCSCEVDAYGSNPYVAGGCSQPANYPEAEGTSGVTMSILKGVSISFGAIILQLLSLRVFDVAKRTTLNKYREKIFKRNGGLLLEQKLSSGEVNMNKVKLFSLKELEKATNNFNMNRVLGKGGQATVYKGMLIDGTIIAVKKFKVHGKIEEFINEFVILSQINHKNVVKLLGSCLETEIPLLIYEFIPNGNLFEYLHEQNEDLPMTWDMRLRIATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEFFQTSQFTEKSDVYSFGVVLVELLTGQKPISLLSPEEAKSLASHFIICMEENRVFDIIDGRVMKEGEKDHIMDVANLASRCLVLNGKRRPTMKEVTLELEGIRRLEGKSNAQERHNELVRSEDYQSWNEYSDTSEIRSSFDLNSRTLSLDDDIHILTT 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01314 726 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 677 IPR045274 GO:0007166
Spst6g01314 726 Gene3D Phosphorylase Kinase; domain 1 371 472 - -
Spst6g01314 726 SMART serkin_6 399 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01314 726 FunFam Wall-associated receptor kinase 2 473 690 - -
Spst6g01314 726 ProSiteProfiles Protein kinase domain profile. 399 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01314 726 Pfam Protein tyrosine and serine/threonine kinase 400 666 IPR001245 GO:0004672|GO:0006468
Spst6g01314 726 SUPERFAMILY Protein kinase-like (PK-like) 380 667 IPR011009 -
Spst6g01314 726 Gene3D Transferase(Phosphotransferase) domain 1 473 695 - -
Spst6g01314 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Spst6g01314 726 Pfam Wall-associated receptor kinase galacturonan-binding 34 98 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01314 Spst-Chr6 12153971 12158214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01314 7 671 Receptor kinase-like Gene Family AT1G16130 43.670 5.86e-178 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Spst6g01314 PK_Tyr_Ser-Thr 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01314 - - vra:106774873 1028.08