Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01312 ATGATCTATTGGTTTTTGTTGTCGGAGTATACTAAAATGACTGAACAACTGGGGGTGCTAAAAGTCATTGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGACCAGTGATCCTTATGTTGTGCTCAAACTAGGGAACCAGACTGCAAAGACCAAGGTAATTAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTAAATTTCACTCTGACAGAATCCCTGGGTGTTCTGAATTTGGAAGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTTCTTAACCTTCAACCATTAGTCTCTGCAGCCAGATTAAGAGACATCTTAAGAGTGTCCTCTGGTGAGACAACCTTAAGGAAGGTCATACCTGACAGTGAAAACTGTCTTGTTCGTGAAAGCAGTATCAATTGTGTTAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTAGAGTCTGGGGAACTAGAATTGACCATCAAGTTGGCCACACCCGTTGCTCCTGCAACATAG 537 0.4209 MIYWFLLSEYTKMTEQLGVLKVIVVQGKRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTESLGVLNLEVFDKDLLKADDKMGNAFLNLQPLVSAARLRDILRVSSGETTLRKVIPDSENCLVRESSINCVNGEVVQNVWLRLRGVESGELELTIKLATPVAPAT 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01312 178 CDD C2_ArfGAP 17 162 - -
Spst6g01312 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 16 170 IPR035892 -
Spst6g01312 178 PRINTS C2 domain signature 58 71 IPR000008 -
Spst6g01312 178 PRINTS C2 domain signature 79 87 IPR000008 -
Spst6g01312 178 PRINTS C2 domain signature 34 46 IPR000008 -
Spst6g01312 178 Pfam C2 domain 19 111 IPR000008 -
Spst6g01312 178 ProSiteProfiles C2 domain profile. 1 115 IPR000008 -
Spst6g01312 178 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 16 170 IPR044562 -
Spst6g01312 178 Gene3D C2 domain 6 128 IPR035892 -
Spst6g01312 178 SMART C2_3c 19 114 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01312 Spst-Chr6 12147984 12149536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01312 13 169 C2H2 Transcription Factor Family AT4G05330 45.223 9.40e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01312 - - gmx:100499880 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03326 3 83111481 83113852 Spst6g01312 6 12147984 12149536 PCT