Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01307 ATGATTCTGAAATTCTTAATCCATGTCATCATTTTGGTAACATGCCCCATACATGTAAACGTATCTGCACAACATCACCGACCTATAGCAAAGCCTGGCTGTGATTCGCGATGTGGATATCTTCCAATTCCCTATCCCTTTGGAATGAAGGGTTCGGAATGCTATGCAGGAAAGTGGTTTGAAATAGAATGCAGAAACACTTCCAGATATCGCAACTACAATCACGCACCTTACCTCAAGTCAATAGGTGTGGAAGTCACATCCATTGATGTTGAGGAAGGCACGGTTACTATCAACCATCCTGTTTACCGAAGTAACTGCAGAATCAAAGATTCTCAGCCGCTCAACCAGTCGCTCGAAGGAAGCCCCTTCGTGTATTCTCAGGGATACAACAAATTTGTGGTCGTAGGTTGCAATATTATTGCTTTTTTGCAGTCAAATGGGTCAGAAGCTAGTGGTTGTGTTTCCATCTGCGACGACCACGACAACGTCGATGATATCGGGAAAATGGAGCTCTTAAACACTGATTGTAATGGCAAGTACTGCTGTGAGACTTCCTTGCCACTGTATCTTAACGAGTATACCACAGAAATAAAAGGTTTAAAGGAGAATGGAACGGGTCATCATGAGTGCAGTTACGCCATGGTTGTAAAACAAGATAGGAACAGCTACCAAGACTATACTGGTGATCCCCTGAAAAGCTACTACTCTCTTACTCATGGTGCGGTGAAGGATCTAGATATGGTCCCAGCGGTGCTTGAATGGGAGATTCTGAACAATTTGGACCTTAAACTCCCTGCAGGTCATCACTCTCACTGTTATGACACGAATGTTACATCTTCGCGATATAAACGCTCAGGCCGGAGATGCTCCTGCGAAGTAGATGCTTACGGTTCCAATCCCTACGTTGCTGGAGGTTGTAGTCAACCTGCTAATCTTCGTCCTAATGCCTATTCTAATTCTGATTCATATTCTGGTTCTCACCATTGGTACATCGAAAGGACGAATCGAACAAAATCGATCATAAAAGGAGTTTCTATAAGCTTTGGGTCCGTCGTTTTACTCCTTGTTTTATGGCGGGTGTTTAAGGTTACAAAAAAAATCGTAGTGAAGAAATACAGAGAAAAAATCTTCAAACGAAATGGAGGACTATTGCTAGAACAAAGATTGTCTTCTGGAGAAGTTAATGTGGATAAAGTTAAACTCTTCAGCTTAAAGGAATTGGAGAAGGCCACCGACAATTTCAATACGAATAGAGTACTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATAGATGGAACAATCATTGCAGTGAAAAAATTTAAGGTCCAGGGAAAGATTGAAGAATTCATCAATGAATTTGTCATCCTCTCACAAATTAATCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTGAAATTCCTTTGCTTGTGTATGAATTCATTCCTAATGGTAACCTTTTCGAGTACTTGCATGAACAAAATGAGGATTTGCCAATGACATGGGACATGCGTTTGAGAATTGCCACTGAAGTTGCAGGAGCTTTATTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGACATAAAGTCAACAAATATACTATTGGATGAAAAGTATAGGGCAAAAGTAGCAGACTTTGGCACATCCAGAATGATTTCCATTGATGTTACTCATCTCACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATTTTTTCAAACTAGTCAATTCACAGAAAAAAGTGATGTCTACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACGGGGCAAAAGCCAATATCCCTCCTATGTCCAGAGGAGGCCAAAAGTTTAGCCTCACATTTCATTATTTGTATGGAGGAAAATCGTGTGTTTGATATTATTGATGAAAGAGTGATGAAGGAAGGGCAGAAAGATGATATCATGGAAGTTGCCAATCTTGCAAGTAGATGTTTAGAGTTGAATGGAAAGAGACGACCAACAATGAAGGAAGTTACATTAGAATTAGAAGGTATCCGAAGATTGGAAGGAAAGTCTAATGCAGAAGAAAGACATAATGAACTTGTTCGAAGTGAAGATTATCAGTCTTGGCCTTGGGATGAGTATTCTAGTACCTCAGAAATAAGGTCAACTTTTGATCTAAATAGCAGAACACCCACCTTGGAGGATGTTCATATTCTTACCGTATAA 2232 0.4019 MILKFLIHVIILVTCPIHVNVSAQHHRPIAKPGCDSRCGYLPIPYPFGMKGSECYAGKWFEIECRNTSRYRNYNHAPYLKSIGVEVTSIDVEEGTVTINHPVYRSNCRIKDSQPLNQSLEGSPFVYSQGYNKFVVVGCNIIAFLQSNGSEASGCVSICDDHDNVDDIGKMELLNTDCNGKYCCETSLPLYLNEYTTEIKGLKENGTGHHECSYAMVVKQDRNSYQDYTGDPLKSYYSLTHGAVKDLDMVPAVLEWEILNNLDLKLPAGHHSHCYDTNVTSSRYKRSGRRCSCEVDAYGSNPYVAGGCSQPANLRPNAYSNSDSYSGSHHWYIERTNRTKSIIKGVSISFGSVVLLLVLWRVFKVTKKIVVKKYREKIFKRNGGLLLEQRLSSGEVNVDKVKLFSLKELEKATDNFNTNRVLGKGGQATVYKGMLIDGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETEIPLLVYEFIPNGNLFEYLHEQNEDLPMTWDMRLRIATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEFFQTSQFTEKSDVYSFGVVLVELLTGQKPISLLCPEEAKSLASHFIICMEENRVFDIIDERVMKEGQKDDIMEVANLASRCLELNGKRRPTMKEVTLELEGIRRLEGKSNAEERHNELVRSEDYQSWPWDEYSSTSEIRSTFDLNSRTPTLEDVHILTV 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01307 743 FunFam Wall-associated receptor kinase 2 385 488 - -
Spst6g01307 743 CDD STKc_IRAK 421 686 - -
Spst6g01307 743 FunFam Wall-associated receptor kinase 2 489 706 - -
Spst6g01307 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Spst6g01307 743 Pfam Wall-associated receptor kinase galacturonan-binding 34 99 IPR025287 GO:0030247
Spst6g01307 743 Pfam Protein kinase domain 416 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01307 743 Gene3D Phosphorylase Kinase; domain 1 387 488 - -
Spst6g01307 743 ProSiteProfiles Protein kinase domain profile. 415 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01307 743 SMART serkin_6 415 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01307 743 Gene3D Transferase(Phosphotransferase) domain 1 489 710 - -
Spst6g01307 743 SUPERFAMILY Protein kinase-like (PK-like) 396 683 IPR011009 -
Spst6g01307 743 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 693 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01307 Spst-Chr6 12096533 12100036 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01307 34 687 Receptor kinase-like Gene Family AT1G16130 44.577 3.68e-180 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Spst6g01307 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01307 - - vra:106774873 1045.42