Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01281 ATGGCACAGAAACAGAAGAAGAGAAGGGAAAGGTCACTGGGTAGCAGCAGAGCTTCAACCCTCTCTCTATCTGCCCCATTAACCATTTTCTCTCCCAGGCTCCTCCCACCTCGCTCTCTCTCTTCAATTCTCCGGGTGACGTTTCACTCTCTCTCTGTCCAATTTGCGTTGGTCGACGAACGAGCCGTGGTAGGTTTGAGAATGTCTGGTGGGGAGGTAGGTGGTGGGGGTGTTTTCGTGGCGTGGGAGGAGCAGGTGATATGCCAGGAGCGTGGGAACCGAGTAATTCACTTCTACCTGAAGGATGCGTTGGGGAATTCGGTGCTGGCGGTTGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCCTGACCATTTCTTGCAGGCCTATGGATCCACACAGCCCATCAATGCTTGCAAATGGAGGGCGCGGCGAGAGGTCGTCGACTGGCTGACTTGTTTGGTCTCCCGGAATCGGTCACACCATGCAGGTGTACAGCTGGATGATTTAGCACAAGCTGATGAATCTCACAAGATTTTAATGCCTGGAATCAATGTCAGTAACAAATATTTACCTGATAAAATGATTTCTAGAAAACTAAAATTTCAAAGTTCAGATATTGAATGGTCAGGCAGTACTTGGTTTTGTGCTAAACAGCTAAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCATTTGTATATATTATGGCTGAAGAAGAAAATCACTATCTTGGCTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTGCGGTGGTTTCACCATGGTCAGGAAGTTAAGCATGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGCGTCAATGGTCCTGCAACTGTTTTGACTCCTAAACATTATGAGATATACCTGGCTGCTGTGCCTCATACCTCTTTATCTGAGATCCATACGTGCTTTAGGCAGTTTAAAAACAATAAGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAGCCTGTACTTTCTTGTTTGAATAGTCCAATTCTCTCAAAGAGAAAGTCAAAGTGTGAAAAATCGCACACAGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGCAATAAGAGAATTAGAAGCTCAAAGGATCAAATATTTGAGAGGGGTTTTTCTGGTCTGCAAATCTCTGGTCCTACCAATGAAATGACAAAATGTGGACCAAAATACCCTAGTTTAAAATTAAAACTATCAAGAAAAACGATGGGTATTAAGGTTATTGGACCAAAGCCTAAACTTTCTTTTCAGGTCAGTGCTAAGATAGAGGTTCTTTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAGATCTTGAGTATGTCTCCGAGGCTGCTGAAGGTCCAGTATGATGATTTGCTTGATTTAGACGGACCACATAAACTAGAGGAATGGGTCCCTGCATCGAGAGTGGCAGATCCTGACAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTACGACCATGCCCTCCTGAATACAATTCAGGTCCTACTTTTGAGATTGGAGCACCAGTGGATGCGTGGTGGTGTGATGGATGGTGGGAAGGTGTCATAACTGCAGTTAATGTCAGTGGAGATGGAATCCTGCAAGTTTATACCCCTGGTGAAGGGAGGTTTCTAAAGGTCGAGCAAAAGAACATTCGATTTTCCCGAGATTGGATCAATAACAGATGGGTTGAAATAGGAGGTAAGCCTGACATATGCAGTTATTTAACTTCAAATGTCAGGTCCAGCATCGGGATGTCTGCTAATTCTGCAGTGGTAGATGGATCTATATCTGATTGCTCTGCTTTAGAAAGTAAATCATCATCAATTCCCAAAGTTGAAGTTGCTAAAAAGGTTGAGCCAGTATCGTCTGGTTTGGAAACACCTGCGGATCTGGAGAATATGAAGGGAATAACTCTGAGGGAGCCACTCTATGCCATTCATGAAGATAAAGATAACAACCCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCTGACCCTAAATGAACACAAGTATAATAACTCTTGTGGAGGCAGTGATGATGACACTGACAATGAAGTCAATGTCAATGGTGATAATGTTGATGAGGAGGAGGGCAGTGAAGGAAATTTTGATTGTTCTGAACCAAAACTTGATGCAGCAGAAGCAATACAAGTTGCATGA 2304 0.4379 MAQKQKKRRERSLGSSRASTLSLSAPLTIFSPRLLPPRSLSSILRVTFHSLSVQFALVDERAVVGLRMSGGEVGGGGVFVAWEEQVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAGVQLDDLAQADESHKILMPGINVSNKYLPDKMISRKLKFQSSDIEWSGSTWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKHVIPQLNLQEGEVFITPHVQVISAECVNGPATVLTPKHYEIYLAAVPHTSLSEIHTCFRQFKNNKLKPFTLTKLRGYSNQPVLSCLNSPILSKRKSKCEKSHTDDDENFTQDDPLRSSNKRIRSSKDQIFERGFSGLQISGPTNEMTKCGPKYPSLKLKLSRKTMGIKVIGPKPKLSFQVSAKIEVLCQDSGIRGCWFRCKILSMSPRLLKVQYDDLLDLDGPHKLEEWVPASRVADPDKLGMRCSGRLTVRPCPPEYNSGPTFEIGAPVDAWWCDGWWEGVITAVNVSGDGILQVYTPGEGRFLKVEQKNIRFSRDWINNRWVEIGGKPDICSYLTSNVRSSIGMSANSAVVDGSISDCSALESKSSSIPKVEVAKKVEPVSSGLETPADLENMKGITLREPLYAIHEDKDNNPGGGCDDEADKAVKTLLTLNEHKYNNSCGGSDDDTDNEVNVNGDNVDEEEGSEGNFDCSEPKLDAAEAIQVA 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01281 767 MobiDBLite consensus disorder prediction 732 749 - -
Spst6g01281 767 SMART agenet_At_2 457 522 IPR014002 -
Spst6g01281 767 SMART agenet_At_2 543 601 IPR014002 -
Spst6g01281 767 Pfam Agenet domain 464 537 IPR008395 -
Spst6g01281 767 MobiDBLite consensus disorder prediction 377 403 - -
Spst6g01281 767 MobiDBLite consensus disorder prediction 718 759 - -
Spst6g01281 767 CDD Tudor_Agenet_AtDUF_rpt1_3 459 537 - -
Spst6g01281 767 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 457 647 - -
Spst6g01281 767 Gene3D - 201 349 IPR043151 -
Spst6g01281 767 ProSiteProfiles BAH domain profile. 234 353 IPR001025 GO:0003682
Spst6g01281 767 SMART BAH_4 234 353 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01281 Spst-Chr6 11805957 11813400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01281 471 599 PHD Transcription Factor Family AT5G58610 27.820 1.03e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01281 - - vun:114188137 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01281 6 11805957 11813400 Spst6g01281 6 11805957 11813400 ECH