Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01222 ATGAAGAGAAGAGAAGATGGGAAAGCTGAAATGGCAGAGTTTGAAGCTTCGAATCTCCAATATCTGTCCCTTTCTTTCTTTAATGGCCTTGCCTTGTACAACCAGTCGCGATCTGAAACTCAACTACTACGGTACTACTTCTACGACTGCTACCCCTGTTTTCCTATTCTTCTTTGCCATCTCCTTCGCCTCCATGGTACTCTGCATGTGCCTCTCCACTCCTCAACCACGCTTCTGATCGCAATGCCTCCTCCTCCTGTCCCTCTTTCTCTCTCCCTCGCTTTCATCGTCCTTGCTCTTCTTCCTCTATCCCTCGCCAACACTGACCCTTCTGATGTTCAAGCTCTTGAGGTTATGTATAATGCGTTGAATAGTTCAACTCAGTTAACGGGTTGGAGAATCGGTGGTGGTGATCCATGTGGACAGTCATGGAAAGGGGTAACGTGTGAAGGTTCAGCCGTTGTTTCCATTGAGCTCTCCGGATTAGGACTCGATGGGACTCTGGGGTACCTGCTTTCGAACCTTATGTCACTCAGAAAGCTTGACATGAGTGACAACAAGATCCATGATACAATTCCCTACCAGTTGCCGCCAAATCTTACAAGCCTGAATCTTGCAAGAAATAATTTATCTGGCAATCTTCCTTATTCCTTTTCTGCCATGGTTTCTCTCAATTATTTGAATTTAAGCAATAATGCGCTCTCCATGACAGTTGGCGATGTTTTTGCCAGTCTTTCAGATCTTGGTACCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTCCTTCATTTGGTGCATTGGGCAATCTTTCTTCTCTTTTCTTGCAGAAAAACCAGTTGACTGGCCCTCTTAGTGTTCTCGTTGGTTTGCCTTTGAATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCTCGCGAGATTAGTTCCATAAGTAATTTCATATACGATGGAAATTCATTTGAGAACCCTCCCGCTCTTCCGCCAGCATTAACTTCACCTCCTCCCAGTGGATCTCACACTCATCGTCATTCTGAATCTGGTTCACATAATAAAACACAAGCCTCTGATAATGAAAATTCTGATGGCCATGCGGGCTTGAAAATAGGGGCTGTTGTAGGCATTGTTTTAGGTTCAGTATTGTTGGCTGCTATTGTGCTGCTTGCACTTGTTTTCTGTATCCAAAAGCAAAAGGGGAAGAAAACGGGTGCAAGGAATTTTAGTGGGAGCCTTCCTCAGGGAGTTATTAATGTAACACCTCAGATGCAAGAGCAGAGGGTAAAAAGCGCTGCTGTTGTTACAGATCTCAAGCCTCGTCCACCAGAAAATGTATCCGTTGAGAGATTACCTGCAAAAAGTGGATCTGTAAGGCACATGAAGTCCCCTATAACTTCCACATCGTACACAATTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAGTTTATAATTGGTGAAGGATCCCTTGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGAAATGGCTATCAAGAAAATAGACAACTCTGCACTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTGTCCAATATGTCACGCCTGCGGCATCCAAACATTGTGACATTGGCTGGATATTGTGCCGAGCATGGCCAACGACTTCTAGTTTATGAGTATATAGGAAACGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCGGCAAGGCTTTGTCTTGGAATGTTCGTGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTACTTGCATGAAGTTTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTTGATGAGGACCTAAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCAAACACAGAACGGCAGGTGTCAACTCAGATGGTCGGTTCATTTGGTTACAGTGCTCCTGAGTTTGCATTATCAGGAGTATACACTGTAAAAAGTGATGTTTATAGCTTTGGAGTGGTTATGCTGGAATTGTTGACTGGTCGGAAGCCGCTTGACAGTTCACGGATTCGATCAGAGCAGTCACTTGTGAGGTGGGCTACCCCCCAACTCCATGATATAGATGCCTTGGCAAAAATGGTCGATCCTACTTTGAACGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCAATGTCTGAGGTGGTGCAAGCATTGGTCCGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCCAGTGACGAATCTGGCATTGGTCACAAGACCCCAGAACATGAGGCCATAGACATGTCATTTTAA 2382 0.4454 MKRREDGKAEMAEFEASNLQYLSLSFFNGLALYNQSRSETQLLRYYFYDCYPCFPILLCHLLRLHGTLHVPLHSSTTLLIAMPPPPVPLSLSLAFIVLALLPLSLANTDPSDVQALEVMYNALNSSTQLTGWRIGGGDPCGQSWKGVTCEGSAVVSIELSGLGLDGTLGYLLSNLMSLRKLDMSDNKIHDTIPYQLPPNLTSLNLARNNLSGNLPYSFSAMVSLNYLNLSNNALSMTVGDVFASLSDLGTLDLSFNNFSGDLPPSFGALGNLSSLFLQKNQLTGPLSVLVGLPLNTLNVANNNFSGWIPREISSISNFIYDGNSFENPPALPPALTSPPPSGSHTHRHSESGSHNKTQASDNENSDGHAGLKIGAVVGIVLGSVLLAAIVLLALVFCIQKQKGKKTGARNFSGSLPQGVINVTPQMQEQRVKSAAVVTDLKPRPPENVSVERLPAKSGSVRHMKSPITSTSYTIASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKEMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSGKALSWNVRVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEDLNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRIRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGIGHKTPEHEAIDMSF 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01222 793 Gene3D Ribonuclease Inhibitor 109 359 IPR032675 -
Spst6g01222 793 Gene3D Transferase(Phosphotransferase) domain 1 562 781 - -
Spst6g01222 793 ProSiteProfiles Protein kinase domain profile. 484 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01222 793 Pfam Leucine rich repeat N-terminal domain 110 149 IPR013210 -
Spst6g01222 793 SUPERFAMILY L domain-like 110 317 - -
Spst6g01222 793 Pfam Leucine rich repeat 198 258 IPR001611 GO:0005515
Spst6g01222 793 CDD STKc_IRAK 490 762 - -
Spst6g01222 793 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 98 763 IPR046959 -
Spst6g01222 793 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 449 561 - -
Spst6g01222 793 Pfam Protein kinase domain 487 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01222 793 SUPERFAMILY Protein kinase-like (PK-like) 461 759 IPR011009 -
Spst6g01222 793 MobiDBLite consensus disorder prediction 329 365 - -
Spst6g01222 793 MobiDBLite consensus disorder prediction 773 793 - -
Spst6g01222 793 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 562 773 - -
Spst6g01222 793 Gene3D Phosphorylase Kinase; domain 1 448 561 - -
Spst6g01222 793 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 109 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01222 Spst-Chr6 11267999 11274292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01222 221 793 Strubbelig Receptor Gene Family AT4G22130 69.686 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst6g01222 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01222 - - gmx:100781455 1224.54