Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01210 ATGATACGGATTGAGTTGCAAGATCCTCACCCCTTTTCCTGGATGTGGACTCTGAATAACCCTGCTAAAAAACAGGTTACCAAGAGGGAAATGATGGGAAAATTGAAGAATTGGAAACGGAGGTCTTATAAGGATGCATTCCTAAACGGTGGTCATTTTGTTCCATCTGGTTATGGAAGTTGTGACCCAAATTATTCACCTTCTCAATTTTTTACTGCTGTACCTGCTTCATTGGTGCCTGCAATAACTCTAAACACAGGTCCCCTAACTTGTGTTGTAGACGCAATTTGGAATCATGCATCAGAGTAG 309 0.4142 MIRIELQDPHPFSWMWTLNNPAKKQVTKREMMGKLKNWKRRSYKDAFLNGGHFVPSGYGSCDPNYSPSQFFTAVPASLVPAITLNTGPLTCVVDAIWNHASE 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01210 102 Gene3D - 17 90 IPR012334 -
Spst6g01210 102 PRINTS Pollen allergen Amb family signature 38 62 IPR018082 -
Spst6g01210 102 PRINTS Pollen allergen Amb family signature 68 91 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01210 Spst-Chr6 11083145 11083763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01210 8 91 Polysaccharide Lyase AT4G22080 47.126 8.41e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01210 K01728 - gmx:100799106 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01210 6 11083145 11083763 Spst6g01210 6 11083145 11083763 ECH