Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01205 ATGAGTAACGGTCTCCACAAGGATCTTTACACCGTTTATACCAACTCAAACATTGTTTACGATTTCACAACTTACAATTCCATTTCTCATGCTCAAAATAAGTTTATAAACATAGACTTTCACTACAGGGAAAAGTTGCCTCTAGTCTTCTTCAAATTCACTATATGCTCTTACCAACCTCTAAGTCGCTCATGCTCCACCCAATCTTTGTCATCTTCAAGAAGGAAGGTACTAGTTGGAGCTTTAAGATTAAGGAAGGTGGCGTGGATTGAGGGTGGAGCCAACTCAATTGGCTTGGTAGAGTTATTTATATGTGGAGTTAAGAAGACTCAGAAGCGGAGGAATCAAAGCAAAGACTGGCAGTTAGTTGGCTTTGGCCTTTTCTTCTTTATCCACATTCCAACTGTCCAATACGCGCAAACCAGCATCCTTGCCTTTCAGCCTTTCAACCTTTCACCACTCCTTGCGCTTTACACTCATCATCATGGTTCAAGCATTGTTCGACACAACCCATCTATCGTTGACACCACCATAATTCTACCACCAAGGCAAGAAGGACCAATGACATTGTTTAATGTTTACGAGCGACACATAGAACAAATCTTCATGGAGTGGACCAGAGGCCACATGCTCGGCCGTGGTTCCACCGCGGCGGTCTACATCGCCATGTCCTGTAGCTCCGATAGAGTGTTTGCGGTGAAGTCGGCCGAGCTCCACCGGTCGGAATTCCTCAGAAGGGAGGAGATGATTCTTTCCACACTCAAGTGTCCTCAAATTGTGGCATACCAAGGTTGTGACACCACGTTTGAGAACGGTGCTTACTTGTTCAACATGTTCATGGAGTACGCGCCTCACGGGACGCTGGCGGAGCGCGGTGGTGGCATGGATGAAGCAATGGTAGGGTCCTACACGCGCCAAATTCTGCAGGGGCTGCAGTACCTCCACTCCAATGGGATAGTGCATTGCGACGTGAAGGGGCAGAACGTGTTGGTGACGGAGCAGGGGGTGAAAATTGCGGACTTGGGTTGCGCTCGGAGGGTGGGGGAGCCATCGGCGATCGCTGGTACACCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGCAGCAGGGGTTCCCTGCTGACGTGTGGGCTCTGGGGTGCACGGTGCTGGAGATGATTACCGGGAAGCCACCATGGCACGGAAGCGGTGACCCAGCTGCGGTGGTTTACAGGATCGGGTTCTTTGAAGAATTGCCGGAGATTCCTAGTTTTGTGTCGGAGCAGGGGAGGGACTTTTTGGGGAAGTGTTTAAAGAGGGACCCAAATGAGAGGTGGTCGGTGGAGGATCTTCTTGGACACGGTTTTGTTAAGGAATGCATGGAATTGAAGTTGTTTTCGTTGGATTCAGACACTCCCACTAGTGTGTTGGAACGAGGATTTTGGGATACATTGGAGACAAGTCAGCAAGGAGCACGTGATTGTCCCTCTCCTAGGGACAGAATTCGTAGGTTGTTTTCGGATGAACCCCTTTGGGTATGGAACAACGATGATGATAATAATGATGAACAATGGGTCACGGTGAGGAGCAATGAGGTCCATGAAGGGTTATCCCTTCCCAAAACGGACAGTACATTTTGTAATATGGTTAGTGATGAGGAGAACGGTTCAGTAAGCTTTTGTGAACCTGAAACTGTAGTATCAACTGTAGTTACATTGGGTAGATGGAATGCTATAAATTGTGATGATTGTTATCTTAGAGGCAGAAACTCTGAGTTTTGCTGCAGAGAATCATTATTGTCAGTTTGTGTGTGTCCAGTGATTGTTCTCCATGGAAAATTTTATTCTCAGGATATGGGAGTTCTTATTTTATCATGCACTGCTTTCTTATTCTTCTCTCTGTCACTCTCTTTAATTCCACTTTGTTTGGATGGGTTAAACACTTTTCATTTTCATCAGTATAATATAATATGGGATAATGTGTGCGCCACATAA 1974 0.4701 MSNGLHKDLYTVYTNSNIVYDFTTYNSISHAQNKFINIDFHYREKLPLVFFKFTICSYQPLSRSCSTQSLSSSRRKVLVGALRLRKVAWIEGGANSIGLVELFICGVKKTQKRRNQSKDWQLVGFGLFFFIHIPTVQYAQTSILAFQPFNLSPLLALYTHHHGSSIVRHNPSIVDTTIILPPRQEGPMTLFNVYERHIEQIFMEWTRGHMLGRGSTAAVYIAMSCSSDRVFAVKSAELHRSEFLRREEMILSTLKCPQIVAYQGCDTTFENGAYLFNMFMEYAPHGTLAERGGGMDEAMVGSYTRQILQGLQYLHSNGIVHCDVKGQNVLVTEQGVKIADLGCARRVGEPSAIAGTPAFMAPEVARGEQQGFPADVWALGCTVLEMITGKPPWHGSGDPAAVVYRIGFFEELPEIPSFVSEQGRDFLGKCLKRDPNERWSVEDLLGHGFVKECMELKLFSLDSDTPTSVLERGFWDTLETSQQGARDCPSPRDRIRRLFSDEPLWVWNNDDDNNDEQWVTVRSNEVHEGLSLPKTDSTFCNMVSDEENGSVSFCEPETVVSTVVTLGRWNAINCDDCYLRGRNSEFCCRESLLSVCVCPVIVLHGKFYSQDMGVLILSCTAFLFFSLSLSLIPLCLDGLNTFHFHQYNIIWDNVCAT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01205 657 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 122 534 - -
Spst6g01205 657 Pfam Protein kinase domain 207 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01205 657 SUPERFAMILY Protein kinase-like (PK-like) 200 482 IPR011009 -
Spst6g01205 657 ProSitePatterns Protein kinases ATP-binding region signature. 211 234 IPR017441 GO:0005524
Spst6g01205 657 Gene3D Transferase(Phosphotransferase) domain 1 195 487 - -
Spst6g01205 657 CDD STKc_MAPKKK 204 450 - -
Spst6g01205 657 SMART serkin_6 205 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01205 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Spst6g01205 657 ProSiteProfiles Protein kinase domain profile. 205 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01205 Spst-Chr6 11042786 11046969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01205 203 478 MAP Kinase Kinase Kinase AT2G32510 53.265 3.42e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst6g01205 Pkinase 9.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01205 K20716 - gmx:100802174 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00723 5 6264390 6265568 Spst6g01205 6 11042786 11046969 ECH
Spst11g01119 11 35522432 35523529 Spst6g01205 6 11042786 11046969 ECH
Spst6g01205 6 11042786 11046969 Spst6g01205 6 11042786 11046969 ECH
Spst6g01205 6 11042786 11046969 Spst3g03236 3 82359403 82360332 ECH