Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01188 ATGTTAGAGATTGTTATCGTTTGTCGTTTCTCCTCTTGCACTTGTCGTCGTTATTCTCGGAGTTTGGATCCGGTGAAATTTGTTTTCCAGCTAGCATTTGCTTCCACATTGAATATGGCTGAGGCTAATGCTGGGTTGTTGGAGTGGCCAACGAAAGATAAGCGCCGCTTTCTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATTAAGTTTTATACTGAATGTTTCGGGATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATATACCAATGCTTTTCTTGGATTTGGTCCCGAACAATCCCATTTTGCTGTGGAATTGACTTATAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCCGGGCCAAGGGTGGAAATGTCACCAGGGAGCCTGGTCCAGTTAAGGGGGGGACATCTGTTATTGCCTTCGTGAAGGATCCTGATGGTTATGCTTTTGAGCTCATCCAAAGACCTTCAACTCCTGAGCCATTGTGCCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATAAAGTTTTATGAAAAGGCTTTGGGTTTGAGGGTCGTAAAGAGGGCTGATAGACCTGAACAAAAGTATACTATAGCAATGCTTGGGTATGCAGAAGAGCATGAGACAACTGTGTTAGAGCTTACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCCTATGCACAGGTTGCTATAGGTACCAATGATGTATACAAGAGTGCTGAGGTTGTGAACATAGTCTCGCAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGACCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGACCCTGATGGATGGAAAGTTGTTTTGGTTGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 969 0.4314 MLEIVIVCRFSSCTCRRYSRSLDPVKFVFQLAFASTLNMAEANAGLLEWPTKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYTNAFLGFGPEQSHFAVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTREPGPVKGGTSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVVKRADRPEQKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTNDVYKSAEVVNIVSQELGGKITRQPGPIPGLNTKITSFLDPDGWKVVLVDNQDFLKELE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01188 322 PANTHER LACTOYLGLUTATHIONE LYASE 39 322 - -
Spst6g01188 322 Gene3D - 183 322 IPR029068 -
Spst6g01188 322 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 56 180 IPR037523 -
Spst6g01188 322 CDD GlxI_Ni 58 178 - -
Spst6g01188 322 ProSitePatterns Glyoxalase I signature 1. 189 210 IPR018146 GO:0004462|GO:0046872
Spst6g01188 322 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 55 184 IPR029068 -
Spst6g01188 322 FunFam Lactoylglutathione lyase 53 182 - -
Spst6g01188 322 ProSitePatterns Glyoxalase I signature 2. 123 135 IPR018146 GO:0004462|GO:0046872
Spst6g01188 322 Gene3D - 30 182 IPR029068 -
Spst6g01188 322 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 187 314 IPR029068 -
Spst6g01188 322 NCBIfam lactoylglutathione lyase 57 181 IPR004361 GO:0004462|GO:0046872
Spst6g01188 322 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 186 314 IPR037523 -
Spst6g01188 322 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 58 177 IPR004360 -
Spst6g01188 322 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 189 309 IPR004360 -
Spst6g01188 322 FunFam Lactoylglutathione lyase 183 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01188 Spst-Chr6 10919312 10928328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01188 189 313 Calmodulin-binding Proteins AT1G08110 28.667 2.33e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01188 K01759 - gmx:100799447 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01188 6 10919312 10928328 Spst6g01188 6 10919312 10928328 ECH
Spst6g01188 6 10919312 10928328 Spst3g03223 3 82252098 82255421 ECH
Spst3g03223 3 82252098 82255421 Spst6g01188 6 10919312 10928328 PCT