Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst6g01187 | ATGGCTGAGGCTAATGCTGGGTTGTTTTATACTGAATGTTTCGGGATGAAGCCTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATATGCCAATGCTTTTTTTGGATTTGGTCCCGAACAATCCCATTTTGCTGTGGAATTGACTTATAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAGATTAGTTGAAGACATCCGGGCCAAGGGTGGAAATGTCACCAGGGAGCCTGCCATTGTGCCAAGTAATGTGCTTCGTGTTGGTGATTTAGAGCGCTCAATAAAGTTTTATGAAAAGGCTTTGGGTTTGAGGGTCGTAAAGAGGGCTGATAGACCTGAACAAAAGTATACTATAGCAATGCTTGGGTATGCAGAAGAGCATGAGACAACTGTGTTAGAGCTTACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCCTATGCACAGGTTGCTATAGGTACCGATGATGTATACAAGAGTGCTGAGGTTGTGAACATAGTCTCGCAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGACCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGACCCTGATGGATGGAAAGTTGTTTTGGTTGACAATCAAGATTTTCTGAAGGAACTGGAGTGA | 687 | 0.425 | MAEANAGLFYTECFGMKPLRKRDVPEEKYANAFFGFGPEQSHFAVELTYNYGVTSYDIGTGFGHFAIATPDVYRLVEDIRAKGGNVTREPAIVPSNVLRVGDLERSIKFYEKALGLRVVKRADRPEQKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNIVSQELGGKITRQPGPIPGLNTKITSFLDPDGWKVVLVDNQDFLKELE | 228 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst6g01187 | 228 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 9 | 94 | IPR029068 | - | |
| Spst6g01187 | 228 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 97 | 220 | IPR029068 | - | |
| Spst6g01187 | 228 | PANTHER | LACTOYLGLUTATHIONE LYASE | 97 | 228 | - | - | |
| Spst6g01187 | 228 | ProSitePatterns | Glyoxalase I signature 2. | 59 | 71 | IPR018146 | GO:0004462|GO:0046872 | |
| Spst6g01187 | 228 | Gene3D | - | 7 | 96 | IPR029068 | - | |
| Spst6g01187 | 228 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 97 | 215 | IPR004360 | - | |
| Spst6g01187 | 228 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 9 | 90 | IPR004360 | - | |
| Spst6g01187 | 228 | Gene3D | - | 97 | 228 | IPR029068 | - | |
| Spst6g01187 | 228 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 92 | 220 | IPR037523 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst6g01187 | Spst-Chr6 | 10896387 | 10899737 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Spst6g01187 | 92 | 219 | Calmodulin-binding Proteins | AT1G08110 | 28.105 | 1.56e-11 | 60.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst6g01187 | K01759 | - | cave:132172107 | 385.185 |