Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01165 ATGGGACATCAGCTTAGGAATGGCTTTGTTTTGTTTCGCCAGTTCCTCTGGCAATTGGCCTTTAGCTTGCTCAATGAACTCATATGTGACTGCTACTTATCGCTGAAGCCAGAAGCTGGTTTTGATGCAATGGTTCCATTGATTTTAGAAGTTAATGGAATCCAACAACTCATCTTCGTCTTGCCCTCAACAAGGTCTCAGAAAATGAATTGTTTCCCATGCTGCAAATCAGAAACTAAAACACCTTCTACCAAGGTAATCTCCACCAAAGTTTCCAAAGGAAGGAGAACATTCAAATCAGTAGCTGCAGCTGTGTCTTTTAAAACAGGCAGTAGCAGGCATAGACAAATAGAGGCGGAGATTAAAAAATTTGGAACTGTCAAAAATGATATCAAAGTATTCACATATGAACAAATAGTTGAAGCAACAAACAACTTCAATCCTGATTGCCTGCTGGGAGTAGGTGGATTTGGGAATGTTTACAAAGGATACTTAAAAAGTGTTGGACAAACTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGCACAAGGAACACGGGAATTTTTTGCAGAAATTTTGATGCTAAGCATGGTGCAACATCCAAACCTTGTGAAGCTGGTTGGTTATTGTGCAGATGACCATCATAGGATTTTGGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACTTGGGTGAAGATAAGGAGCCTTTGGATTGGAAGACCAGGATGAAAATAGCCGAAGGAGCAGCTAGAGGACTTGAATATTTGCATAACAGTGAAGAAACACCTATTATATATCGTGATTTCAAAGCATCTAACATACTGTTAGATGAGGATTTTAATCCAAAGCTCTCTGATTTTGGCCTTGCCAAGATTGGTCCTATAGAAGGCCAGGACCATGTGACAACCAGGGTGATGGGAACTTTTGGTTATTGTGCACCAGAGTATGCTGCTACGGGTAAACTTAGCACAAAGTCGGATATTTATAGTTTTGGGGTTGTGTTTTTGGAAATAATCTCGGGTAGGAGAGTATTTGACACTGCAAGAGTTACAGCAGAGCAAAACTTGATTGATTGGGCACAACCTTTGTTTAAGGACAGAACGAAGTTTACTCTAATGGCTGATCCTTTGCTTAAAGGTCAGTTCCCAGTGAAGGGCCTATTTCAAGCCCTTGCAGTGGCAGCAATGTGTTTACAAGAGGAAGCTGACACACGACCTTTCATGGATGATGTTGTCACGGCTCTTGCACATATAGCAGTTCACAAAGTTGGAGAAAAAGATATAGCCGGTGACTCTTTACAATATGCTGGCCACGTTGAATCTTTCAGAGCTACAAATTCTATTGGATCCGAACGAGCGTAG 1377 0.4125 MGHQLRNGFVLFRQFLWQLAFSLLNELICDCYLSLKPEAGFDAMVPLILEVNGIQQLIFVLPSTRSQKMNCFPCCKSETKTPSTKVISTKVSKGRRTFKSVAAAVSFKTGSSRHRQIEAEIKKFGTVKNDIKVFTYEQIVEATNNFNPDCLLGVGGFGNVYKGYLKSVGQTVAVKVLNREGAQGTREFFAEILMLSMVQHPNLVKLVGYCADDHHRILVYEFMANGSLENHLLDLGEDKEPLDWKTRMKIAEGAARGLEYLHNSEETPIIYRDFKASNILLDEDFNPKLSDFGLAKIGPIEGQDHVTTRVMGTFGYCAPEYAATGKLSTKSDIYSFGVVFLEIISGRRVFDTARVTAEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEADTRPFMDDVVTALAHIAVHKVGEKDIAGDSLQYAGHVESFRATNSIGSERA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01165 458 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Spst6g01165 458 PANTHER OS07G0668900 PROTEIN 71 429 - -
Spst6g01165 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Spst6g01165 458 FunFam Serine/threonine-protein kinase PBS1 223 437 - -
Spst6g01165 458 CDD STKc_IRAK 152 420 - -
Spst6g01165 458 SUPERFAMILY Protein kinase-like (PK-like) 130 418 IPR011009 -
Spst6g01165 458 Gene3D Phosphorylase Kinase; domain 1 105 222 - -
Spst6g01165 458 FunFam receptor-like protein kinase FERONIA 108 222 - -
Spst6g01165 458 Pfam Protein kinase domain 151 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01165 458 Gene3D Transferase(Phosphotransferase) domain 1 223 439 - -
Spst6g01165 458 ProSiteProfiles Protein kinase domain profile. 146 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01165 Spst-Chr6 10714376 10718695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01165 69 429 Glycoside Hydrolase AT3G07070 53.552 3.50e-136 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst6g01165 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01165 - - gmx:100305361 653.669