Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01160 ATGATCTCTTTAATGAAATGCTCAACATCATCTCTCACTGGTTCTGCTTTCTCAACCAGAAAACTTCCCCTTGCAAAGCCTCAACTTCTCACATTTTCAACCATTGCCAACGTTGAACAAAACACGGCCCCCTCTCAGTTGAGCTCCCAGAAACTTCTCTACCTTTCATCCTCTGAGAACTTGGCATTGGTTAAGAGAAAGAGGGTGACGGAGTGCCAGGCCTATGAGGCTGACAGGTCACGCCCAATAGAGATTAACATTGCGCTGCCGGATGAAGATGCTGCTCAGAGGGTGAAGATTGGGGTGTATTTTGCCACCTGGTGGGCTTTGAATGTGGTGTTCAACATCTACAACAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTTTGTCCCTTGCTGCTGGCTCCCTCATGATGTTAATCTCCTGGGCCACCAGAGTTGCTGAGGTCCCAAAAGTTAACTTGGACTTCTGGAAGGCCTTGTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTTTCTTTCACTCACATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTAGTGTCAAGTTTCTTGCTTGGAGAAGCATTCCCAATGCCGGTCTATCTGTCACTGGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCAGGAATATATTCTCAAAGAAAGGAATGAAGGGAATGTCTGTTAGTGGAATGAACTACTATGCCTGCCTTTCCATAATGTCTCTGTTGATACTCACACCATTTGCCATTGCTGTGGAGGGCCCCAAGGTTTGGGCCGCAGGATGGCAATCAGCTGTGTCTCAGATTGGTCCCAATTTTGTTTGGTGGGTAGTTGCTCAGAGTGTCTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTCGATCAGATTTCTCCCTTAACATTTAGCATCGGAAACACAATGAAGAGGATTTCGGTCATTGTCTCTTCTATTCTTATCTTCCACACGCCTGTTCAGCCCATCAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGTGCATTATCCTCTCCTTTTAAACTGA 1191 0.461 MISLMKCSTSSLTGSAFSTRKLPLAKPQLLTFSTIANVEQNTAPSQLSSQKLLYLSSSENLALVKRKRVTECQAYEADRSRPIEINIALPDEDAAQRVKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVAEVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSSFLLGEAFPMPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILTPFAIAVEGPKVWAAGWQSAVSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQVHYPLLLN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01160 396 PANTHER SOLUTE CARRIER FAMILY 35 99 389 - -
Spst6g01160 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
Spst6g01160 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
Spst6g01160 396 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01160 Spst-Chr6 10670453 10672351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01160 47 390 Antiporters AT1G61800 83.140 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01160 K15283 K05350 gmx:100804205 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01160 6 10670453 10672351 Spst8g00841 8 7544694 7551679 ECH
Spst6g01160 6 10670453 10672351 Spst6g01160 6 10670453 10672351 ECH