Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01119 ATGCATCCTGATCAGAGAAAAAAGTCATCCGTGGATGTGGACTTCTTTACTGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGCGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCCGATGCTACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCTGATATTGTGGAGATCAAGCATATTCTCTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTTGAACTCATGGAATCTGATTTGCATCAGGTCATCAAAGCTAATGATGATCTGACGCCAGAGCATTACCAGTTTTTTCTGTATCAGCTTCTTCGAGGCTTGAAGTATATTCACACTGCAAATGTATTTCACCGTGATCTAAAGCCAAAGAACATTTTAGCAAATGCTGACTGCAAGCTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACCCCCACTGCTATTTTCTGGACAGATTATGTTGCTACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCGGCTATAGACATATGGAGCATTGGCTGCATATTTGCGGAACTTTTGACTGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTTCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCCTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTAGAAGATACTTGGGCAGCATGCGTAAGAAGAAGCAAGTTCCTTTCTCACATAAGTTTCCAAATGCAGACCCTCTTGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCTAAGGATCGGCCTTCTGCCGAAGAGGCTCTAGCGGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCTGTTACCAAGATGGAATTTGAGTTTGAGAGACGCCGGATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTGAAGGAATTTCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAAGGAGGAACTGTTGTTCCACCTGAGAGGCAACATGCATCATTACCCAGACCTTGTGTGTTGTATTCAGACAACAAAATACAGAATACGTCGGAGGTTGCAGATGATCTATCCAAATGCTGCATCAAAGAAGTTGAGAAACAGCCGGTAGATAGGAGTACTGTTATCCCAATGTCTCGGCTTCCCTTACAAGCACCTCAAAATATTCCAGGTGTTGCAGCAAGGCCGGGTAAGGTTGTTGGTTCAGTGATGCGATACAACAACTGTGGGGTAGCAGTGACGGCAGAGACTGAGCAGCGGAGAGTAGTCAGGAATCCATCTGTTTCAGCTCAGTATGCTGCGTCCAGCTGTTCGTATCCTAGGAGAAACACCGGCTATAAAAATGAGAGGGGGACAGAGGATGAAGGGATTGAAGGTTCAAATGGACTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTGGCTGCTGCTCCAGGTGGACCTGGTGGTCAGTGGTATTGA 1692 0.4379 MHPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLGSMRKKKQVPFSHKFPNADPLALRLLERMLAFEPKDRPSAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVVPPERQHASLPRPCVLYSDNKIQNTSEVADDLSKCCIKEVEKQPVDRSTVIPMSRLPLQAPQNIPGVAARPGKVVGSVMRYNNCGVAVTAETEQRRVVRNPSVSAQYAASSCSYPRRNTGYKNERGTEDEGIEGSNGLQPKPQYMARKVAAAPGGPGGQWY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01119 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Spst6g01119 563 FunFam Mitogen-activated protein kinase 111 339 - -
Spst6g01119 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01119 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Spst6g01119 563 FunFam Mitogen-activated protein kinase 15 119 - -
Spst6g01119 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01119 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Spst6g01119 563 CDD STKc_TDY_MAPK 24 361 - -
Spst6g01119 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Spst6g01119 563 MobiDBLite consensus disorder prediction 516 544 - -
Spst6g01119 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst6g01119 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Spst6g01119 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01119 Spst-Chr6 10166302 10171607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01119 1 563 MAP Kinase Gene Family AT5G19010 79.965 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst6g01119 Pkinase 8.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01119 - - gmx:100814013 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03148 3 81486299 81492040 Spst6g01119 6 10166302 10171607 PCT